Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq12990 178 3e-42 >seq12990 Length=87999 Score = 178 bits (196), Expect = 3e-42 Identities = 248/345 (72%), Gaps = 21/345 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 86348 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 86407 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| | |||| | ||| |||||||| | |||| ||| Sbjct 86408 GAGTCTGGACCGTATCTCAGTTCCAGTATGGCTGATCATCCTCTCAGATCAGCTATAGAT 86467 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| |||||||| ||||||||| |||||| || ||||| | Sbjct 86468 CATTGCCTTGGTAGGCTATTACTCCACCAACTAGCTAATCTAATATAGGCTCATCTAATA 86527 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 86528 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 86571 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 86572 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 86630 Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 ||||||| |||| || ||||||| | ||| ||| ||||||||| Sbjct 86631 CACTAAGTTATACCAT--AGCAAGC-TACAATATAACTCCGTTCG 86672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998267632128