Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq13027 150 4e-34 >seq13027 Length=117870 Score = 150 bits (166), Expect = 4e-34 Identities = 288/420 (69%), Gaps = 22/420 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGT-CGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGAC 59 ||||||| ||| | ||| |||||||||||| |||||| |||| ||||| ||||| || Sbjct 16497 CGACTACCCCTTTACGGACTCGCCTTAGGAACCGACTAACCCTACGCAGATTAACTTAAC 16438 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCC 118 ||||||||| ||| | || | | | || ||| | | |||||||| ||| | Sbjct 16437 GTAGGAACCCTTAGATTTTTGGTGAGAGTGTTTTTCACACTCTTTTACGCTACTTATGTC 16378 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACAC 177 ||||||||||| | | ||||| || |||| || ||||| ||| || Sbjct 16377 AGCATTCTCACTTCCGATATCTCCAGCAGTTT-TCACAAACCACCTTCATAGACTTACGG 16319 Query 178 GACGCTCCCCTACCCAACC----------ACACAGGTTGC---CACAGCTTCGGCGGATA 224 ||||||| ||||| || | || || |||| |||||| | | Sbjct 16318 AACGCTCCGCTACCGCGCCTATTGATCGAAATCAATAAGCACTCACATCTTCGGTATACA 16259 Query 225 ACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACG 279 ||| ||||||| |||||| ||||||| ||| |||| ||| |||||||| ||||| Sbjct 16258 GCTTTAGCCCCGGTACATTTTCGGCGCAGAAAAACTTATTTAGACAAGTGAGCTGTTACG 16199 Query 280 CACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACAT 339 | ||||| ||||||||||||||||||||||||||||| | ||| | || || | Sbjct 16198 CTTTCTTTAAAGGATGGCTGCTTCCAAGCCAACCTCCTAGCTGTAATGGTTTTTCTACTT 16139 Query 340 CCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 |||| |||||| || | || ||| |||||| | ||||||||| ||||||||| || Sbjct 16138 CCTTCCCCACTTAGCTGTAATTTTGGGACCTTAGATAGTGATCTGGGTTGTTTCCCTTTC 16079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177443873792