Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01002034.1 Length=277 Score E Sequences producing significant alignments: (Bits) Value seq13125 77.0 5e-12 seq13210 73.4 6e-11 >seq13125 Length=414483 Score = 77.0 bits (84), Expect = 5e-12 Identities = 90/121 (74%), Gaps = 8/121 (7%) Strand=Plus/Minus Query 15 AATAACGCTTTATATTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACGGGTTTA 74 ||||| | |||| |||| |||||||||||| | | |||||| ||||| |||| Sbjct 88044 AATAATACGTTATGATTTTCTTTGTGCGTTGAATTA---CTGAGTTTACCTACGGATTTA 87988 Query 75 GGTTTATAATCAGTACTTAACGTAACGTAACACGTTACGGAGAAGCTTGTGCAGTGGCTC 134 ||||||| |||| ||||||| ||||| |||| |||| |||||||||| || | || Sbjct 87987 AGTTTATATTCAGAACTTAACATAACG-----CGTTGCGGAAAAGCTTGTGCGGTAGATC 87933 Query 135 T 135 | Sbjct 87932 T 87932 >seq13210 Length=1522225 Score = 73.4 bits (80), Expect = 6e-11 Identities = 86/115 (75%), Gaps = 10/115 (9%) Strand=Plus/Minus Query 15 AATAACGCTTTATATTTTTGTTTGTGCGTTGACTGAAGTTCAAGTTTATGTACGGGTTTA 74 ||||| | |||| |||| |||||||||||| | | ||||||| |||||| |||| Sbjct 1375117 AATAATACGTTATGATTTTTTTTGTGCGTTGAATTA---CTAAGTTTACGTACGGATTTA 1375061 Query 75 GGTTTATAATCAGTACTTAACGTAACGTAACACGTTACGGAGAAGCTTGTGCAGT 129 |||||| |||| ||||||| ||||| |||| ||| |||||||||| || Sbjct 1375060 AGTTTAT--TCAGAACTTAACATAACG-----CGTTGTGGAAAAGCTTGTGCGGT 1375013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787098894492