Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq12990 329 8e-88 >seq12990 Length=87999 Score = 329 bits (364), Expect = 8e-88 Identities = 322/412 (78%), Gaps = 16/412 (4%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||||||| || |||||||||||| ||||||||| ||||||| Sbjct 86316 CTTTACAACCCAAAGGCCTTCTTCACTCATGCGGCATGGCTGGATCAGGCTTTCGCCCAT 86375 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 86376 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTA 86435 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||||| |||||| |||| | |||| ||| ||| ||||| || || Sbjct 86436 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAGGCTATTACTCCACC 86495 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| || | || ||||| |||| | | || | ||| | | | Sbjct 86496 AACTAGCTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTAG 86549 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | ||| ||| ||||||||| ||||||||| |||| || | | ||| Sbjct 86550 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 86601 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACT-CGTCAGCGAAGCAGCAAGCTGCTTCC 362 || |||| | |||||||||||||||| |||||| || | | |||||||| | Sbjct 86602 AGATTCCTATACATTACTCACCCGTCTGCCACTAAGTTATACCA-TAGCAAGCTACAATA 86660 Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 86661 TAACTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 86712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222237934208