Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8793 224 2e-56 >seq8793 Length=2966 Score = 224 bits (248), Expect = 2e-56 Identities = 243/314 (77%), Gaps = 10/314 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||| ||||||||||| ||| | || ||| || || |||||||| Sbjct 1329 GAACGAGACTCTAACCTGCTAACTAGTGATGCGTTAATTGAGACGT-ACCTACTTCTTAG 1271 Query 80 AGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||| | || | |||| | ||| || |||| | |||||||||||||||||||||| Sbjct 1270 AGGGATAAGCGGTGTTCAACCGCATG--AGATTGA-GTAATAACAGGTCTGTGATGCCCT 1214 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACT-GACAGAGC--CAACGAGTTCATCACCTT 194 ||||||||| |||| |||||||||||||||| || || || ||| | ||| | ||||| Sbjct 1213 TAGATGTTCGGGGCTGCACGCGCGCTACACTGGAAAGTGCAGCAA-GCGTTATTAACCTT 1155 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||| ||||||||||||||||| | ||| | ||||| | || |||||| |||| ||| Sbjct 1154 GGCCGAAAGGTCTGGGTAATCTTTTGAAAGCTTTTCGTGTTTGGAATAGAGGATTGAAAT 1095 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 |||| ||||| |||||||||| || |||||| | ||||| ||| | | ||||||||| Sbjct 1094 TATTTCTCTTGAACGAGGAATTCCCAGTAAGTATGAGTCATTAGCTCATGCTGATTACGT 1035 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 1034 CCCTGCCCTTTGTA 1021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947074420224