Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq13027 214 3e-53 >seq13027 Length=117870 Score = 214 bits (236), Expect = 3e-53 Identities = 243/323 (75%), Gaps = 16/323 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||| || |||||||||||||| | | |||||||||||||||| | || ||||||| Sbjct 15128 AGAGCACTTGATGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATA 15187 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||| ||||| | | |||| | |||||||||||||||||||||||||||||||| | Sbjct 15188 AGCTGTGGGGAAT-TGTCAACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAAC 15246 Query 121 --CCTTTG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 ||| | || ||| ||| | || ||||| ||||| ||| || |||||| Sbjct 15247 TAGCTTAGCTAGTTATTACATAC--------TAAGTATGTAAAGCAAACTTGGTGAACTG 15298 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 15299 AAATATCTAAGTAGCCAAAGGAAAAGAAATCAACCGAGATTCTGTTAGTAGTGACGAGCG 15358 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 ||| ||| || || | ||| |||| | | |||| |||||||||||| | Sbjct 15359 AAAGCGGAAAAGGCT---AGTGATTTAAGAATAAGAATTAGAATACTCTGGAAATAGTAA 15415 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| |||||||| || ||| Sbjct 15416 CCATAGAAGGTGATAGTCCTGTA 15438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918278238528