Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq12990 159 7e-37 >seq12990 Length=87999 Score = 159 bits (176), Expect = 7e-37 Identities = 156/200 (78%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || | ||||||| |||| || Sbjct 86308 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGGCATGGCTGGATCAGGCT 86366 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 86367 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 86426 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| | ||| || | |||||||||| | |||| ||| | | || ||| ||| | Sbjct 86427 GTTCCAGTATGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAGGCTAT 86486 Query 260 TACCCCGCCTACTACCTAAT 279 ||| || || |||| ||||| Sbjct 86487 TACTCCACCAACTAGCTAAT 86506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068658298496