Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq13072 136 1e-27 >seq13072 Length=199900 Score = 136 bits (150), Expect = 1e-27 Identities = 245/356 (69%), Gaps = 4/356 (1%) Strand=Plus/Plus Query 2520 ATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATC 2579 ||| ||||| || |||| ||||||| ||| ||| |||| | || |||||||||| Sbjct 187981 ATATCCAATAATTTCTATAGAAGATGCAATGAGTGAAGACGATTACGAAGGTTGGAAATT 188040 Query 2580 TCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAA 2639 ||||||| | | || ||||| ||||||||||||| || || || || || || || Sbjct 188041 ACTTACTGCAAAATTGGGGAGTAAAATTCAATTGGTTGGGGATGATTTATTTGTTACAAA 188100 Query 2640 CACTG--CTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAA 2697 || || | | | ||||| || | |||| | || || | | || ||||| Sbjct 188101 TTGTGAACTAA--TAGGCAAAGGAATAGAAGAAAAAATGGCAAATGCTGTGCTGATCAAG 188158 Query 2698 GTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCT 2757 || ||||| || || || || |||||||||| ||||| ||||| || ||| | Sbjct 188159 CCAAATCAAATAGGAACGTTAACAGAAACTTTTGCTGCTATTGAAATAGCAAAATCAAAC 188218 Query 2758 GGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGAT 2817 |||| ||| || | || ||||| ||||||||||| ||||| ||||||| || || Sbjct 188219 AACTACAAAGCTGTTATTTCTCACCGCTCAGGTGAAACAGAAGACACAACAATATCTCAT 188278 Query 2818 ATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 || ||||||||| | || || ||||| || || || || |||| ||| |||| Sbjct 188279 ATAGCAGTTGCATCAAATTGCGGGCAAATAAAAACCGGGTCGCTGTCGCGTTCTGA 188334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156013833509352