Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_029107.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq7453 89.7 1e-13 >seq7453 Length=2343 Score = 89.7 bits (98), Expect = 1e-13 Identities = 176/254 (69%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 12321 CCGCGTGGCATTCGCAACAACAACCCCGGCAACATCCGCTGGGGCGACAACTGGCAAGGT 12380 || || ||||| || || |||||||||||||||||| ||||| ||||| ||| Sbjct 541 CCTCGCGGCATCCGTAATAACAACCCCGGCAACATCGAGTGGGGTTCTCCGTGGCAGGGT 600 Query 12381 CTCATTCCCGCGCACCAGCGC-ACTGACCCGGCGTTCTGCCAATTCAGCGAAGC-GCGCT 12438 || | ||||||| ||| || || || || |||||||||||||| ||| | ||| | Sbjct 601 CTTGT-CCCGCGCGACAGGGCGACCGATCCACGGTTCTGCCAATTCACCGACCCAGCG-T 658 Query 12439 ATGGCATCCGTGCCATCGCCTGCGTCCTGCTGAACTACCGTGTCAAGACCGGCATGCCGG 12498 | |||||||||||| | || ||| ||||||| |||| || || | || | ||| | Sbjct 659 ACGGCATCCGTGCCCTTGCGGTCGTGCTGCTGACCTACTATGGCA--AACGCAAAGCCCG 716 Query 12499 GCATCGGCGACAAGGGCATCGACACCATGCGCGAGATCGTTTCCCGCTGGGCGCCGCCCA 12558 || || || ||||||| | |||||||| | | || ||||| || || Sbjct 717 ----CGACGGCAGCCGCATCGATTCGGTGCGCGAGGTTATCGAGCGTTGGGCACCACCAT 772 Query 12559 ACGAGAACGACACC 12572 ||||||| ||||| Sbjct 773 CCGAGAACAACACC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134068489100988