Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_033015.1 Length=11280 Score E Sequences producing significant alignments: (Bits) Value seq13101 96.9 2e-16 >seq13101 Length=323720 Score = 96.9 bits (106), Expect = 2e-16 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 2026 TGGAATAACCACTTCAGATCAGAAACTGTGGATGACGTGATGAAAGAAACTCTGGACAAG 2085 ||||||||| || |||||| ||| |||||||| ||| | | ||||| || | Sbjct 297244 TGGAATAACAGATTTAGATCATTAACAGTGGATGAACCAATGTATCATACTCTAGATGAT 297303 Query 2086 ATATTTGACACCACTATCTTTGGAAAAACACATAAGGCCTATGAAAAGACTTTCTTTTAT 2145 ||||||| |||| || || |||||||||| || |||||||| | || | ||| Sbjct 297304 ATATTTGGAACCAGAATTTTCTCTAAAACACATATAGCATATGAAAAAAGCTTTATATAT 297363 Query 2146 GTGCCTAACGGCCATGAGGCATACTCCTGGGAAGGCCAGGGAGGGGGTATCGAAGGTCTG 2205 || ||| | | | || | || | ||| | || ||| | || ||||||||||| | Sbjct 297364 GTTCCTGATGAAAAGGACACTTATTATTGGAATGGACAGTGTGGAGGTATCGAAGGGTTA 297423 Query 2206 AACCAAGACACATGGGTTATTACATACTTAGGTCAGATGAA 2246 || ||||| |||||||| |||||||||| || || || || Sbjct 297424 AATCAAGATACATGGGTAGTTACATACTTGGGGCAAATTAA 297464 Score = 80.6 bits (88), Expect = 2e-11 Identities = 137/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 2396 TGAAAGATTTTGGGCACAAGGTCAAGGTACTAGAGTCTTATGGCTCATCTGTATACTTTG 2455 ||||| ||||| |||||| | ||| || ||| |||||| || |||||||| Sbjct 297614 TGAAATCATTTGGACACAAGATTAAGATAGCAGAAAGTTATGGTTCTGAATTATACTTTA 297673 Query 2456 CATTCTCAAAAAGTGCGTCAGTACATGAAATAGAACTACCGCAGGGATATAGAAAGGTTC 2515 ||||| ||| || ||| || | |||||| ||||| || | || ||||| ||| Sbjct 297674 ATTTCTCTAAATCAGCTTCAATAGGTACAATAGAGCTACCTCAAGTCTACAGAAAAATTC 297733 Query 2516 AGAAATGCTATGGAGCCTCGAACGCTTTGCTGCCTACGCTGGATGAATATATAGGAAGCT 2575 | |||| |||| || || || || | | ||||| ||||||||||| | |||| Sbjct 297734 AAAAATCACATGGTGCAAATAATGCCTTTATTTCAACGCTAGATGAATATATTGCAAGCG 297793 Query 2576 CCTTTAGTAATGCGCATAG 2594 | || |||||||| ||||| Sbjct 297794 CATTCAGTAATGCTCATAG 297812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35975433373728