Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_033327.1 Length=6873 Score E Sequences producing significant alignments: (Bits) Value seq13101 497 5e-137 >seq13101 Length=323720 Score = 497 bits (550), Expect = 5e-137 Identities = 600/807 (74%), Gaps = 12/807 (1%) Strand=Plus/Plus Query 1801 TATGAAGATCGTGCGAGAGCTTTAGCACAAGAGAAGAGTGTAATGGAATTCCTCGATATA 1860 ||| ||||||| || ||| | | || ||||| |||| ||| ||||||||| | ||| || Sbjct 297058 TATAAAGATCGCGCAAGATCACTTGCTCAAGAAAAGAATGTGATGGAATTCTTAGATTTA 297117 Query 1861 TATTCTGATGAACAAGCTATGACACTTGGAGAATTACCTTTGACGAGAAAACTTTACTCA 1920 || || |||||||| ||||| | |||||| | ||||| | | ||| || || ||| Sbjct 297118 TACAGCGACGAACAAGCAATGACTTTGGGAGAACTCCCTTTAGCTAAAAAGCTGTATTCA 297177 Query 1921 TTTAGAACTATCTTAAACTCATACAAAGGATCTTCAGTTCTT-TACATAAATCTTGATGC 1979 ||||||||||| ||| |||| |||| | || | | |||| || || || | ||||| Sbjct 297178 TTTAGAACTATTCTAACTTCATTCAAA-GCTCATAAAGTCTTGTATATCAACTTAGATGC 297236 Query 1980 ATCTAGTTGGAATAATCGTTTCAGGAGACTAACGGTTGATCATCCTATGTCACAAACTTT 2039 ||| ||||||||||| | || || | |||| || ||| | || |||| || ||| | Sbjct 297237 ATCAAGTTGGAATAACAGATTTAGATCATTAACAGTGGATGAACCAATGTATCATACTCT 297296 Query 2040 GGATGATATATTTGGTGTAAAAATCTTCTCTAAAACACATCTAGCATTTGAGAAATCATT 2099 |||||||||||||| | ||| ||||||||||||||| |||||| ||| ||| || Sbjct 297297 AGATGATATATTTGGAACCAGAATTTTCTCTAAAACACATATAGCATATGAAAAAAGCTT 297356 Query 2100 TATATATGTACCTGATGGGTTAGATTTTTATTACTGGGATGGACAAGCAGGTGGGATAGA 2159 ||||||||| ||||||| || |||||| ||| ||||||| || || || || Sbjct 297357 TATATATGTTCCTGATGAAAAGGACACTTATTATTGGAATGGACAGTGTGGAGGTATCGA 297416 Query 2160 AGGATTAAATCAAGATACATGGGTTGTGGCATATTTGGGACAAATAAAGACTGCTATGAA 2219 ||| |||||||||||||||||||| || |||| ||||| ||||| ||| |||| ||||| Sbjct 297417 AGGGTTAAATCAAGATACATGGGTAGTTACATACTTGGGGCAAATTAAGTCTGCCATGAA 297476 Query 2220 AGCTTTGGGGTTTAATTATTATGTTCTGTGTAAAGGTGATGATGTTCGATTAGCTGTATT 2279 | | ||||| | || ||||||||||| |||||||| |||||||| || | || | || Sbjct 297477 ACCATTGGGATACAACTATTATGTTCTCTGTAAAGGAGATGATGTAAGAATTGCGATTTT 297536 Query 2280 AATACCACC---TCTAGTATCTAGACAACAGTCTATAGAAAGAATCAAATCTAATATTGT 2336 ||||||||| ||||||| | | |||| | | ||| ||| | | ||| || Sbjct 297537 AATACCACCAATATTAGTATCACAAAACCAGT---TGCACTCAATAAAAACAAGTATAGT 297593 Query 2337 CAAAACAT-TAAAAGAGTC-TTTAAGTAAGTTTGGACACAAAATAAAAATAGAAGAAAGT 2394 |||||| | |||| || || || | | ||||||||||| || || |||| ||||||| Sbjct 297594 -GAAACATCTTCAAGACTCATTGAAATCA-TTTGGACACAAGATTAAGATAGCAGAAAGT 297651 Query 2395 TATGGTTCGGAAAATTATTTTTCTTTCTCTAAAACAGCATCTCTTAACACGGTAGAATTG 2454 |||||||| ||| || ||| |||||||||| |||| || | || |||| | Sbjct 297652 TATGGTTCTGAATTATACTTTAATTTCTCTAAATCAGCTTCAATAGGTACAATAGAGCTA 297711 Query 2455 CCACAAGTGTTCAGAAAAATTCAAAAATCTCATGGAGCGAATAATGCATTTATATCCACT 2514 || ||||| | |||||||||||||||||| ||||| || |||||||| ||||| || || Sbjct 297712 CCTCAAGTCTACAGAAAAATTCAAAAATCACATGGTGCAAATAATGCCTTTATTTCAACG 297771 Query 2515 CTAGATGAATATATAGCTAGTGCATTTAGTAATGTACATAGTAGTTGCAAAGTGTCTCCA 2574 |||||||||||||| || || ||||| ||||||| ||||||||||| ||||| || || Sbjct 297772 CTAGATGAATATATTGCAAGCGCATTCAGTAATGCTCATAGTAGTTGTAAAGTATCACCT 297831 Query 2575 AATATAACTCCGATCTATGCTGTAGCA 2601 ||| | || || | |||||||| ||| Sbjct 297832 AATGTTACACCTGTTTATGCTGTCGCA 297858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21875136781944