Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq45434 210 7e-50 >seq45434 Length=1529 Score = 210 bits (232), Expect = 7e-50 Identities = 435/643 (68%), Gaps = 22/643 (3%) Strand=Plus/Plus Query 42439 CAGGGGCAGCCGTTGCGCGTGGAATATACCAGCGTATTGGCGCAGGCGCAGAAATCGATA 42498 ||||| || ||||||||||||||||| |||||||| |||| || || |||||| | | Sbjct 7 CAGGGCCAACCGTTGCGCGTGGAATACACCAGCGTGATGGCTCAAGCACAGAAAGCAGTG 66 Query 42499 GGCACCGGCGCGATTGAGCGATTTGTTCTGTTTCTCGGCAATCTGGCC-CGCACAAATCC 42557 |||| || | || ||||| || || | || || ||| | ||| | ||| Sbjct 67 GGCATTGGTTCAATCGAGCGTGCCGTAGGCTTCATTGGGAACTTGGTCGCGCTGGATTCC 126 Query 42558 CG-ACGCGCTCGACAAGCTGGATACCGATGGGGCAGTGGATGTTTACGGCGACATGCTCG 42616 | | || ||||||| |||| ||| | | || |||| ||| ||||||||| | Sbjct 127 AGCAGGCTGCCGACAAGTTGGACGTTGATCAGTCGGTTGATGAGTACTTCGACATGCTTG 186 Query 42617 GGGTACCGCCAACCATCACCAAATCCGATGAGCAGGTGCAGGCCGAACGGGAACAGCGGG 42676 | || || | ||||| |||||||| ||||| ||||||||||| ||||| || ||||| Sbjct 187 GCGTGCCTACCACCATTACCAAATCTGATGAACAGGTGCAGGCAGAACGTGAGCAGCGAT 246 Query 42677 CGCAGCAGCAACAGACGGCACAGGCCATGCAGATGGGCGCAGCGGGGGCGGACATCGCCA 42736 |||||||||| || | || ||| ||||||||||| | | | || || ||||| | Sbjct 247 CGCAGCAGCAGCAAGCAGCGCAGAGTCTGCAGATGGGCACTGGCGCAGCAGATATCGCGA 306 Query 42737 AAACCCTCAGTCAGGCAGAGAT--GCAATC----------GCCCAGCGTACTGACGGGAT 42784 | || ||||| ||||| | | || ||| | ||||| | | || Sbjct 307 AGACACTCAGCCAGGCCGGAACCGGCGATCCTAATTTGCTGACCAGCATTCAACAGGCCA 366 Query 42785 TGGTGAAAGG---AGGCGCGTCAGAA----TGACACCAGAGCAACGGCGACAACGGCAGA 42837 || | |||| ||| ||| ||| | |||| | || ||| || |||||| || Sbjct 367 TGCAGCAAGGCCAAGGGGCG-CAGCAATGATGACTCGCGAACAATTGCAACAACGCCACG 425 Query 42838 TCGACGATGTGAAACAGGTGATGAGCAGTGAGTCGGGACGGCGGTTTGTCTGGCGACTGC 42897 ||||| ||||| ||||| ||| ||| ||| || || || || || ||| | || | Sbjct 426 CTGACGACGTGAAGCAGGTAATGGGCACTGAAATTGGTCGCCGTTTCGTTTGGGGGCTTC 485 Query 42898 TGGAGCAGGCCGGGGTCTTTCGCACCTCGTTTACCGGTGAAACCAACAGCACCATGTTCC 42957 | || || || || || ||||||| ||| || ||||| ||| |||||||| || ||| Sbjct 486 TCGATCAAGCTGGTGTTTTTCGCATCTCATTCACCGGCGAAGTTAACAGCACAATTTTCA 545 Query 42958 GCGAGGGCAACCGTAACGCCGGACTGGCGTTATTTAACGAGGTCTTTGGCCTGTGTCCGG 43017 || || ||||| || | || |||||| |||| ||||| || || | || || | Sbjct 546 ATGAAGGTAACCGCAATTCAGGGCTGGCGCTATTCAACGACGTGTTGAAGTTCTGCCCTG 605 Query 43018 CGCTGTATCTGAAAATGGCCGCCGAGGCACAGGAAGACAGGGA 43060 ||||| || || |||||||||||||| || ||||||| || Sbjct 606 AACTGTACCTAAAGATGGCCGCCGAGGCCGAGAAAGACAGAGA 648 Score = 161 bits (178), Expect = 3e-35 Identities = 178/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 43329 TTTGAGCCGGTCGCCAAAGAACTGGGGCTGACGCAGGCGCAAGCTCAAAAACTGGTGGAT 43388 || || ||| ||||||||||| |||| ||||| || | || || || || ||||| || Sbjct 1276 TTCGAACCGATCGCCAAAGAATTGGGCCTGACCCAAGAACAGGCGCAGAAGCTGGTCGAC 1335 Query 43389 ATCTATCCGCAAATCCAGCAGCGGCAAGCACAAGCCTGGGGCCAGCAAGTGGCCGAGTGG 43448 |||||||| || |||||||||| || ||| |||||||| || |||| | | || ||| Sbjct 1336 ATCTATCCCCAGATCCAGCAGCAACAGGCAGAAGCCTGGAGCAAGCAGGGAGAGGAATGG 1395 Query 43449 GGCGAGCAGGTGAAAACTGACCCGGAAATTGGCGGTGAGAAATTTACCGCCAATGTGGGA 43508 ||||||| || ||| ||||| || || |||||||| || | ||||| ||||| || Sbjct 1396 CGCGAGCAAGTTAAATCTGACAAAGAGATCGGCGGTGATAAGTACACCGCGAATGTAGGC 1455 Query 43509 CAGGCGCAGAAAGCGCTCGACCAGTTCGGTAATCCGGCATTACGCGATTATCTGGAG 43565 | || ||||| ||||| || ||||| |||| || || || ||||| || |||||| Sbjct 1456 AACGCACAGAAGGCGCTTGATCAGTTTGGTAGCCCTGCGTTGCGCGAATACCTGGAG 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166642724374944