Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6679 96.9 1e-14 seq6795 84.2 9e-11 >seq6679 Length=3560385 Score = 96.9 bits (106), Expect = 1e-14 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 349075 GTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGC 349134 || || ||| ||||| | ||| |||| || ||||| ||||| || | | || || || Sbjct 1424765 GTTGATAATTTCCTTCAATCTCGGCACACCGAGGGTTACGTTTTTCGATGATACACCAGC 1424824 Query 349135 AAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAG 349194 ||||||||||| | ||||||| ||| ||| ||||||||||| |||| |||| || Sbjct 1424825 GAAGTGGAAGGTGTTCAGGGTCATCTGAGTGGCGGGCTCGCCGAGAGACTGCGCCGCCAG 1424884 Query 349195 GATGCCTACCATCTCGCCGGGCG 349217 ||| |||||||||||||||| Sbjct 1424885 TGCGCCGACCATCTCGCCGGGCG 1424907 >seq6795 Length=442027 Score = 84.2 bits (92), Expect = 9e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 349061 ATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTG 349120 ||||| || | |||| | ||||||||||| | |||| ||| | || | |||| || Sbjct 186336 ATCTTCGGACTCGCGTTAATAATCTCCTTGATACGCGGCACACCCTGCGTGATGTTCATG 186395 Query 349121 GCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATG 349180 ||||| || ||||| |||||||| || | |||||||| ||| ||| |||||||| || Sbjct 186396 GCCGCTACACCGGCGAAGTGGAACGTTTTGAGGGTCATCTGAGTGCCCGGCTCGCCAATA 186455 Query 349181 CACTGGCCCGCGAG 349194 | ||| | ||||| Sbjct 186456 CTCTGCGCGGCGAG 186469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082610749030824