Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2144 526 2e-144 seq19922 383 1e-101 >seq2144 Length=13752 Score = 526 bits (582), Expect = 2e-144 Identities = 1245/1857 (67%), Gaps = 39/1857 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || ||||| || ||||| || |||| ||| || | |||||| ||||| || || Sbjct 4929 ATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCTGT 4870 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || || || || ||| | ||||||| || |||| | || ||||||| || || Sbjct 4869 TTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGGTTC 4810 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||||| ||||| || || ||||| ||||| ||| || ||||||||||| ||||| Sbjct 4809 AGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCAT 4750 Query 65257 GTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | || | ||| | || |||| ||||| |||||||| || || ||| || | Sbjct 4749 TTTGATTGTG-GACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCACATTTT 4691 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| | || |||| || | || ||||||| ||| || || |||| ||| Sbjct 4690 GAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTTCATAT 4631 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || |||||| ||| ||| | |||| | | ||| ||| |||| | || || | Sbjct 4630 CATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAA 4571 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 |||| || ||||| || || | |||||||| || ||| |||||| || |||||| Sbjct 4570 ACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCAT 4511 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 | || || | || ||||| || ||||| |||||||| || |||| | || || || | Sbjct 4510 TATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTAC 4451 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 ||| ||||| | | || || | | || |||||| ||| | | ||| || Sbjct 4450 GCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGA--GATTT---GT 4396 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | | || ||||||||| | || || | || | || | || || Sbjct 4395 GGGTA-CCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCAT 4337 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 | | || ||| || || | || || || | |||||||| || | |||| || | | Sbjct 4336 AGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGT 4277 Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795 ||||||| ||||| || || |||| || || |||| ||| ||||| || || |||| Sbjct 4276 AAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG-ATAC 4218 Query 65796 C-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | ||| | | |||| || || || |||||||||||||| || || |||||||| | Sbjct 4217 CGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTT 4158 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 || ||||| | ||||| || | ||||||||||||||||||||| || ||||| Sbjct 4157 AAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAG 4098 Query 65915 TTGCGTGTCACCA-CATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTT-TAGGAC 65972 || || || | | || | || || ||| | ||| || || || | | Sbjct 4097 TTTTTGGTAACAATCTTG---GTGACCTCT---TTGAGCT---TCACAAAGTCGTACGTC 4047 Query 65973 GA-TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 || || || || ||| ||| || || | ||||| | ||||| ||| Sbjct 4046 TTCTCCGGTGTTACGAACATA------TTGAGA---GCTATCGATGCCAAATTGCAAACA 3996 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || ||||| || || || | |||||| |||||||| ||||||| |||||||| || Sbjct 3995 GCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATT 3936 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||||| ||| ||||| || |||||||| || || | ||||||| | | ||||||||| Sbjct 3935 GTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGT 3876 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 ||||| ||||| ||||| |||||||||||||| |||||| | | ||||| | | Sbjct 3875 GTGCCAGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACA 3816 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 || || | ||| | ||||| | | ||||| | || || |||||||| Sbjct 3815 CGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAA 3756 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || || | || | |||||||||||| || |||||||| |||||||| ||| ||| Sbjct 3755 ACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCC 3696 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || |||||| | ||| |||||||| ||||| ||||| ||||| || || || || Sbjct 3695 ACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACGATGT 3636 Query 66392 TCCTCAATGCC-GTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 ||||| |||| ||| || | | ||| || | ||||||||||| |||| |||||| | Sbjct 3635 TCCTCTTTGCCAGTG--TTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAG 3578 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 | || ||||| ||||| || | || | |||||||||||| || || || || || | Sbjct 3577 GCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTG 3518 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGT 66569 | |||||||| || || | || ||| || || | || || ||| | ||||||||||| Sbjct 3517 CCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCAC 3458 Query 66570 CGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCT 66629 || | | ||| ||||| || || |||||||||||||||||||| || | || Sbjct 3457 TAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCACCTGCTGACT 3398 Query 66630 TCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGA 66689 | ||||| ||||| | |||| | || || || || || |||||| | Sbjct 3397 TTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCA 3338 Query 66690 TGGTCAGGAGGTAGCATGAACTAAGTTG-GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748 |||| ||||| |||||||| || || ||| || | || || || | ||| || || Sbjct 3337 TGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTG-GTTGCAGCTGCGAAAAGTGTT 3279 Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCA 66808 |||| || || || ||| | | || | ||||||| ||||| | | | |||| Sbjct 3278 GGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCA 3219 Query 66809 ATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACC 66868 || | || ||||| || |||| ||| ||||||||| | || || || ||||| | | Sbjct 3218 ATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTC-AGC 3160 Query 66869 AGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | || ||||| | | || || || || |||| ||||||| ||||| || Sbjct 3159 AACTTTGCCATTGATTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATA 3103 >seq19922 Length=1369 Score = 383 bits (424), Expect = 1e-101 Identities = 499/685 (73%), Gaps = 9/685 (1%) Strand=Plus/Plus Query 61103 AAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATG 61162 ||||||| |||||||| |||||||| |||||||| || ||| | ||||| ||||||| | Sbjct 680 AAAAGGCCGAAGCTTCATTCTGGACCGTGGAGGAAGTGGATCTATCCAAGGACATGACCG 739 Query 61163 ACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||||| || || | | ||| | || |||||| |||||| ||||| ||||||| Sbjct 740 ACTGGGCTCGACTAACAGACAATGAGCGTCACTTCATTTCACATGTTTTGGCTTTCTTTG 799 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||| || || ||||||||| | | || || ||| ||||| |||||| Sbjct 800 CCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAAGTGCAAA 859 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | | ||||| ||||| || || ||||||||||||||||||||||||||||||||||| | Sbjct 860 TCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAAA 919 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402 ||||||| || |||||||| || ||||| |||| | | | || || | |||| Sbjct 920 TGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATCAGCGCGACTACCTCTTCA 979 Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 ||||||| || ||||| || || |||||||| || || |||||||| | ||||||| Sbjct 980 ATGCCATTGAAACGATGCCCGCTGTGAAGCGTAAGGCAGATTGGGCTCTGTCTTGGATCT 1039 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 || | |||| | ||||| || || | | || ||||| | ||||| || | | Sbjct 1040 CCTCGAAGGCGGCAAACTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTCGAAGGCATCT 1099 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | ||||| || ||||| | ||||| ||| ||||||| ||||| ||||||||||||| Sbjct 1100 TCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTC 1159 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 | |||||| |||||| |||| || ||||||||||| | ||||| ||||||||||| Sbjct 1160 TTACCTTCTCGAATGAGCTGATCTCCCGCGACGAGGGACTTCATTGCGATTTTGCTGTGC 1219 Query 61643 TGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGT 61700 | | ||| | | || |||| | ||||| |||| ||||| | ||||| | Sbjct 1220 TTATGTTCCAGCACT---TGGTACAGCGTCCCAGTCG--TGAGCGCATCATCGAGATCAT 1274 Query 61701 -TCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCA 61759 ||| || || || | || || |||||||| || || |||||| | || ||| ||| Sbjct 1275 CTCG-GATGCTGTGAAGATAGAGCAGGAATTCCTTACAGACGCTCTACCAGTCAATCTCG 1333 Query 61760 TCGGCATGAATTGTGGACTAATGTC 61784 |||||||| | || | | || |||| Sbjct 1334 TCGGCATGGACTGCGCAGTATTGTC 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397335098080880