Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq41184 129 2e-25 >seq41184 Length=706 Score = 129 bits (142), Expect = 2e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 54180 GGCACCATCAAATTGTATGAAGCCAAAAACCGTTTATTTAGTTCAATCAACCGCACGCTG 54239 || |||||||| || | ||| | |||| || | || || | ||||||||||||||| Sbjct 2 GGAACCATCAAGCTGCACGAACCGAAAAGCCAGCTGTTCAGCACCATCAACCGCACGCTG 61 Query 54240 GGCGAGGGGATTGCGCAACTGCTTTCGGCGCAGATCCTCGCCGGGCAATATGAGCGGCAA 54299 ||||| || || || ||||| |||||||||||| | ||||| || || ||||| || Sbjct 62 GGCGAAGGCATCGCCAGCCTGCTGTCGGCGCAGATCATGGCCGGACAGTACGAGCGCCAC 121 Query 54300 AAAGCGATGCTCACCCAGTCAGAGATCAAACTGCTTCACGCCCAGGTGAACCCCCATTTT 54359 || | || | | ||||| |||||||| ||| | || || ||||| ||||| ||||| Sbjct 122 AAGCAGCTGTTGGCGCAGTCGGAGATCAAGCTGTTGCATGCGCAGGTCAACCCGCATTTC 181 Query 54360 TTGTTTAATGCGCTTAACACCATTAAAGCGGTGATCCGTCGCGA 54403 |||| |||||| | || || | ||||||||||| || || Sbjct 182 CTGTTCAATGCGTTGAATACGCTGGTGGCGGTGATCCGCCGTGA 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175445399339532