Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5 165 1e-38 >seq5 Length=5596510 Score = 165 bits (182), Expect = 1e-38 Identities = 97/101 (96%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3679341 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 3679282 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259 ||||||||||||||| || ||||||||||||||||||||| Sbjct 3679281 ACCACCACCCATAGATTCGTGAAAGAGCTATCAATCTGTCC 3679241 Score = 93.3 bits (102), Expect = 7e-17 Identities = 83/101 (82%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 3679589 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 3679531 Query 76 AAACTTCCATT--GGCTGGAAGCCAATAGTCCCTCTAAGAA 114 || || | || |||| | || | | |||| | |||||| Sbjct 3679530 AATCT--CGTTACTGCTGAAGGCAATTTGTCCATTTAAGAA 3679492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796756989732