Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq150 158 2e-36 seq229 89.7 9e-16 >seq150 Length=658614 Score = 158 bits (174), Expect = 2e-36 Identities = 119/139 (86%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 || ||||||| ||||||| ||||||||||||||||||| ||||||| | | |||||||| Sbjct 205276 TACAACTAACGTGTCTCACTACGGTCTAAACCCAGCTCATGTTCCCT-TGAATGGGTGAA 205218 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 |||||||| |||| ||||| | |||| ||||||||||||||| ||||||||||||| Sbjct 205217 CAATCCAATGCTTGGTGAATTTTTCTTCACAATGATAGGAAGAGCCAACATCGAAGGATC 205158 Query 163 AAAAAGCAACGTCGCTATG 181 ||||||| |||||||||| Sbjct 205157 AAAAAGCGGCGTCGCTATG 205139 >seq229 Length=371942 Score = 89.7 bits (98), Expect = 9e-16 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 ||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 211830 ATGATAGGAGGAGCCGACATCGAAGGATCAAAAAGCGACGTCGTTATGAACGCTTGG 211886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854352392832