Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq131 246 9e-63 >seq131 Length=742427 Score = 246 bits (272), Expect = 9e-63 Identities = 217/269 (81%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| |||| | ||||||| Sbjct 647217 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTGTTCGTCACTA 647158 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 || |||| |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 647157 TCTGCCCGAACTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 647098 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||| |||||||||||||||||||||||| | ||||||| |||||||||| |||||| Sbjct 647097 GTTTCTTAGGCTCCCTCTCCGGAATCGAACCATGATTCCCCATTACCCGTTGCAACCATG 647038 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 647037 ATAGTCCTGGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 646978 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT 266 | | || |||| || ||| ||||||| Sbjct 646977 GTACTAGACCATACG-TTCTGCAAGTTAT 646950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510315840512