Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4410 185 1e-44 seq3792 158 2e-36 >seq4410 Length=11626 Score = 185 bits (204), Expect = 1e-44 Identities = 194/242 (80%), Gaps = 11/242 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| | |||||| |||||| | Sbjct 808 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACACTTACTGGGAATT-C 865 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||||||| || ||||||||| ||| ||| ||||||| ||| | | | || Sbjct 866 CTCGTTGAAGGGAAATAATTGCAATTCCCTAGCCCGATCACGAAAGGTTTTAACATGTTT 925 Query 120 ACCCGGACCTGTCGGCCAAGGT-GATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTG 177 ||| | ||| |||||||||| || || | || ||| | | || | ||||||||||||| Sbjct 926 ACCGAGGCCTTTCGGCCAAGGAAGAAAG-CACGCTGA-TCCTTCCATTGTAGCGCGCGTG 983 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTA 236 | |||| |||||||||||||||||||||||||||||||| ||||| || |||| | ||| Sbjct 984 CAGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA--TTTCGTGTGGCTA 1040 Query 237 AA 238 || Sbjct 1041 AA 1042 >seq3792 Length=9805 Score = 158 bits (174), Expect = 2e-36 Identities = 171/220 (78%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| || |||||| |||||| | Sbjct 3126 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCACTTACTGGGAATT-C 3183 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| | | || |||| |||| | ||||| | ||||| | |||| | || Sbjct 3184 CTCGTTCATGGAGAATAATTACAATCCCCAATCCCAAGCACGAAAAGGGTTCACTCGGTT 3243 Query 120 ACCCGGACCTGTCGGCCAAGG-TG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||| ||| |||| ||| || | | || || ||| | ||||||||||||||||| Sbjct 3244 TCCCGCTCCTTTCGGAGTAGGATGCACATACACGCTGATCTCTTCAGTGTAGCGCGCGTG 3303 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||| | ||||||||||||||||||||||||||||||| Sbjct 3304 CGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 3343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751769342330