Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq419 86.0 3e-15 seq3792 80.6 1e-13 >seq419 Length=560957 Score = 86.0 bits (94), Expect = 3e-15 Identities = 61/69 (88%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| || | ||||||| ||||||||| ||||||||| Sbjct 555052 GGAAAAGAAACTAACAAGGATTCCCCCA--AGCGGCGAGCGAACAGGGAGGAGCCCAGCA 554995 Query 61 CCGAATCCC 69 ||||||||| Sbjct 554994 CCGAATCCC 554986 >seq3792 Length=9805 Score = 80.6 bits (88), Expect = 1e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| || | ||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 1480 GGAAAAGAAACCAAACGGGATTCCCTTAGTAACGGCGAGCGAACAGGGAGCAGCCCAGCG 1421 Query 61 CC 62 || Sbjct 1420 CC 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230331610080