Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4410 239 7e-61 seq3792 223 6e-56 >seq4410 Length=11626 Score = 239 bits (264), Expect = 7e-61 Identities = 203/244 (83%), Gaps = 7/244 (3%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| Sbjct 968 CATTGTAGCGCGCGTGCAGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 1026 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC--CAACCATAGTC 134 | ||| ||||| | ||| | ||||||||||||| || | || | | | || Sbjct 1027 AT-TTCGTGTGGCTAAACACCACTGATCCCTCTAAGAAGTCA-CTACGGCGAGCTTACCG 1084 Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 | | ||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 1085 CA--GAACTAGTTAGCAGGTTAGAGTCTCGTTCGTTATCGGAATAAACCAGACAAATCAC 1142 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||||||||||||||||||||||| ||| ||||||||||||| || |||||| Sbjct 1143 TCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAACTCTCAATC 1202 Query 255 TGTC 258 |||| Sbjct 1203 TGTC 1206 >seq3792 Length=9805 Score = 223 bits (246), Expect = 6e-56 Identities = 206/252 (82%), Gaps = 17/252 (7%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 3287 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 3345 Query 76 AAACTTCCATT-GGCTGGAA-GCCAATAGTCCCTCTAAGAAGCCA---GCCACCAACCAT 130 || ||| ||||| || ||| ||||||||| ||||| | || || | Sbjct 3346 TTTCT--CATACGGCTGAAACGCCGTCTGTCCCTCTAGGAAGCGCTGTGGCAGCA--CGA 3401 Query 131 AGTCGATGG----GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 || |||| | ||| |||| ||| || |||||||||||||||||||||||||||| Sbjct 3402 AG--GATGCCACAGTCTAATTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGA 3459 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 3460 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGGGC 3519 Query 247 TATCAATCTGTC 258 | |||| ||||| Sbjct 3520 T-TCAACCTGTC 3530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796555601022