Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4410 221 2e-55 seq3792 174 3e-41 >seq4410 Length=11626 Score = 221 bits (244), Expect = 2e-55 Identities = 184/222 (83%), Gaps = 5/222 (2%) Strand=Plus/Minus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| | Sbjct 1027 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCTGCACGCGCGCTACAAT 969 Query 169 GACAGAGCCAACGAG--TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 | || || || | ||| || |||||||| |||| || ||||| | ||||||| | Sbjct 968 GGAAGGATCAGCGTGCTTTCTTC--CTTGGCCGAAAGGCCTCGGTAAACATGTTAAAACC 911 Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 | ||||| | ||| ||| | |||||||||||| | |||||||||||||| || |||||| Sbjct 910 TTTCGTGATCGGGCTAGGGAATTGCAATTATTTCCCTTCAACGAGGAATTCCCAGTAAGT 851 Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||||||| | |||||||||||||||||||||||||| Sbjct 850 GTGAGTCATCAGCTCACGTTGATTACGTCCCTGCCCTTTGTA 809 >seq3792 Length=9805 Score = 174 bits (192), Expect = 3e-41 Identities = 203/264 (77%), Gaps = 10/264 (4%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||| ||||||||| |||| | ||||| ||| || ||| ||||||||||||| Sbjct 3386 GCTTCCTAGAGGGACAGACGGCGTTTCAGCCGTATG--AGAAAGAG-CAATAACAGGTCT 3330 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC-CAACGAGTTC 186 ||||||||||||||||| | ||||||||||||||||||||||| |||| || || || Sbjct 3329 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGA-AGAGATCAGCGTGTAT 3271 Query 187 AT-CA-CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | || ||| ||| |||| ||| || | || || | | ||||||| ||||| | Sbjct 3270 GTGCATCCTACTCCGAAAGGAGCGGGAAACCGAGTGAACCCTTTTCGTGCTTGGGATTGG 3211 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| ||||||| | | |||||||||| || |||||| || ||||||||| || Sbjct 3210 GGATTGTAATTATTCTCCATGAACGAGGAATTCCCAGTAAGTGCAAGTCATCAGCTTGCA 3151 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 3150 TTGATTACGTCCCTGCCCTTTGTA 3127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946900097536