Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4410 100 5e-19 seq3792 77.0 5e-12 >seq4410 Length=11626 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| | |||||| |||||||| | || | || | Sbjct 8418 GTACGAGAGGAACCGTAGG-TTCAGAC-ATTTGGTTCATGCGGCTGGCCGATAGGCCAAT 8361 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || ||||||||||||||||| ||||||| ||||| |||||||||| ||||||| Sbjct 8360 GCTGCGAAGCTACCATCTGCGGGATTATAACTGAAAGCCTCTAAGTTAGAATCC 8307 >seq3792 Length=9805 Score = 77.0 bits (84), Expect = 5e-12 Identities = 86/114 (75%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | | | | ||||| || | ||| |||| |||| Sbjct 7883 GTACGAGAGGAACCGCTGCCTC--GGACATTTGGTACATGTGCTTGTTCGACCGAACAGT 7826 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | | ||||||||||||| | ||||||| |||||||||||||||| ||||||| Sbjct 7825 GGCACGAAGCTACCATCCGTCGGATTATAGCTGAACGCCTCTAAGCTAGAATCC 7772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818948730368