Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3792 475 1e-131 seq4410 291 2e-76 seq801 77.0 1e-11 >seq3792 Length=9805 Score = 475 bits (526), Expect = 1e-131 Identities = 422/518 (81%), Gaps = 20/518 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTAC-AAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTAC 58 ||||||||| ||||||| || || || ||| || | |||| ||||| | |||||||| Sbjct 4061 GTACTCATTACAATTACGAACACACATAAGTGCAATCGTATTGTTATTTTTCGTCACTAC 4120 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4121 CTCCCCGAACTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 4180 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 | ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct 4181 TCTCTCAGGCTCCCTCTCCGGAACCGAACCCTGATTCCCCGTTACCCGTTACAACCATGG 4240 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| | || |||||||||||||||||||| ||||| | | ||| || ||||| | Sbjct 4241 TAGGCGAATAACCTACCATCGAAAGTTGATAAGGCAGTTACTCGAAGGATATGTCGCCAG 4300 Query 239 CTCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA-----AGGAGCCCCGAAG 291 | |||||| ||||||| | | |||||||| || |||||| ||| ||| ||| Sbjct 4301 CGCAAGGCTATGCGATCAGCTAAAAGTTATTCAGAGTCACCACCAGTAGGCACCCGAAAG 4360 Query 292 GGCGTTGGTTTTTTATCTAATAAATAC--ACCCCTTCCG--AAGTCGGGGTTTTTAGCAT 347 || | | | || |||||||||| | | |||| || ||| | ||||| |||| Sbjct 4361 TGCCCTTGGTCTTGGTCTAATAAATGCGTCCGCCTTGCGGCAAGAC----TTTTTTGCAT 4416 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGAT 406 |||||||||||||||||||||| ||||||||||| |||| ||| ||| | |||| || Sbjct 4417 GTATTAGCTCTAGAATTACCACAGTTATCCATGTAAGTAGTTTAC-ATCCAGTAAATTAT 4475 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||||||||||||| ||||||| || |||| | || |||||||||||||| Sbjct 4476 AACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-AGATGGTTTGTACTTAGACATGCA 4534 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||| Sbjct 4535 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 4572 >seq4410 Length=11626 Score = 291 bits (322), Expect = 2e-76 Identities = 373/507 (74%), Gaps = 18/507 (4%) Strand=Plus/Plus Query 6 CATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65 |||||| || ||| | | || | ||| |||| || |||| || |||||||||||| || Sbjct 1919 CATTCCGATAACAGGCCTCATA-GAGATCTGTCTCGTTATTGATAGTCACTACCTCCTCG 1977 Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125 | | || |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1978 AATTGAGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 2037 Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 ||||||||||||||| ||||||||| || | |||||||||||| ||||||| || | Sbjct 2038 GGCTCCCTCTCCGGAGTCGAACCCTGATCCTCCGTTACCCGTTACAACCATGGCAGTCAC 2097 Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG 245 | || ||||||| ||||||||||||||||| | || || | ||||||| |||| Sbjct 2098 ATGGACTTCCATCGACAGTTGATAGGGCAGAAACTCGATCGATCTGTCGCCGGTACAAGA 2157 Query 246 CCATGCGATTCGTTAAGTTATTATGAATCACCAA-----GGAGCCCCGAAGGGCGTTGGT 300 ||||||||| | || ||||| || ||||||| | |||| || |||| Sbjct 2158 CCATGCGATCAGCGAAATTATTCAGAGTCACCAAAACAGGTTGCCCTGA------TTGG- 2210 Query 301 TTTTTATCTAATAAATACACCCCTTC-CGAAG-TCGGGGTTTTTAGCATGTATTAGCTCT 358 | || |||||||| | | | | | ||| | | | ||| ||| |||||||||| Sbjct 2211 TCTTCGTCTAATAAGTGCGCAGGTCCACGAGGAACTTGCTTTAGTGCACGTATTAGCTCC 2270 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 | | || | | ||||||| | ||| || | ||| | |||| ||| ||| |||||| Sbjct 2271 AAATTTTTCGCAGTTATCCGTTTAGATAGTCAAAATCGAGTAAATTATAGCTGTTTTAAT 2330 Query 419 GAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCT 477 ||||| ||||||| |||| || || | || | | || | |||||||||||||||||| Sbjct 2331 GAGCCTTTCGCAGATTCATCGTTTAAAGATG--TGTTCTCACACATGCATGGCTTAATCT 2388 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 || | |||||||| || ||||||| Sbjct 2389 TTTATCTAAGCATATCACCGCTGGCAG 2415 >seq801 Length=439144 Score = 77.0 bits (84), Expect = 1e-11 Identities = 86/113 (76%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||||| | ||| ||||||| |||||||| |||||| ||||||| || | Sbjct 376202 ACCATGGTAGGCGCAGAGCCTGCCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCG 376261 Query 232 TCGCCGGCTC-AAGGCCATGCGATTCG--TTAAGTTATTATGAATCACCAAGG 281 ||||||| || || || |||||| || | | ||||| || ||||||||| Sbjct 376262 TCGCCGGTTCGTAGACCGTGCGATCCGCCTCCATTTATTCAGAGTCACCAAGG 376314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509921777152