Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06-
05] 31,662 sequences; 485,009,472 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq3792 475 1e-131
seq4410 291 2e-76
seq801 77.0 1e-11
>seq3792
Length=9805
Score = 475 bits (526), Expect = 1e-131
Identities = 422/518 (81%), Gaps = 20/518 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTAC-AAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTAC 58
||||||||| ||||||| || || || ||| || | |||| ||||| | ||||||||
Sbjct 4061 GTACTCATTACAATTACGAACACACATAAGTGCAATCGTATTGTTATTTTTCGTCACTAC 4120
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4121 CTCCCCGAACTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 4180
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct 4181 TCTCTCAGGCTCCCTCTCCGGAACCGAACCCTGATTCCCCGTTACCCGTTACAACCATGG 4240
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
||||| | || |||||||||||||||||||| ||||| | | ||| || ||||| |
Sbjct 4241 TAGGCGAATAACCTACCATCGAAAGTTGATAAGGCAGTTACTCGAAGGATATGTCGCCAG 4300
Query 239 CTCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA-----AGGAGCCCCGAAG 291
| |||||| ||||||| | | |||||||| || |||||| ||| ||| |||
Sbjct 4301 CGCAAGGCTATGCGATCAGCTAAAAGTTATTCAGAGTCACCACCAGTAGGCACCCGAAAG 4360
Query 292 GGCGTTGGTTTTTTATCTAATAAATAC--ACCCCTTCCG--AAGTCGGGGTTTTTAGCAT 347
|| | | | || |||||||||| | | |||| || ||| | ||||| ||||
Sbjct 4361 TGCCCTTGGTCTTGGTCTAATAAATGCGTCCGCCTTGCGGCAAGAC----TTTTTTGCAT 4416
Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGAT 406
|||||||||||||||||||||| ||||||||||| |||| ||| ||| | |||| ||
Sbjct 4417 GTATTAGCTCTAGAATTACCACAGTTATCCATGTAAGTAGTTTAC-ATCCAGTAAATTAT 4475
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466
||||||||||||||||||||||| ||||||| || |||| | || ||||||||||||||
Sbjct 4476 AACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-AGATGGTTTGTACTTAGACATGCA 4534
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||
Sbjct 4535 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 4572
>seq4410
Length=11626
Score = 291 bits (322), Expect = 2e-76
Identities = 373/507 (74%), Gaps = 18/507 (4%)
Strand=Plus/Plus
Query 6 CATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65
|||||| || ||| | | || | ||| |||| || |||| || |||||||||||| ||
Sbjct 1919 CATTCCGATAACAGGCCTCATA-GAGATCTGTCTCGTTATTGATAGTCACTACCTCCTCG 1977
Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125
| | || |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 AATTGAGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 2037
Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185
||||||||||||||| ||||||||| || | |||||||||||| ||||||| || |
Sbjct 2038 GGCTCCCTCTCCGGAGTCGAACCCTGATCCTCCGTTACCCGTTACAACCATGGCAGTCAC 2097
Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG 245
| || ||||||| ||||||||||||||||| | || || | ||||||| ||||
Sbjct 2098 ATGGACTTCCATCGACAGTTGATAGGGCAGAAACTCGATCGATCTGTCGCCGGTACAAGA 2157
Query 246 CCATGCGATTCGTTAAGTTATTATGAATCACCAA-----GGAGCCCCGAAGGGCGTTGGT 300
||||||||| | || ||||| || ||||||| | |||| || ||||
Sbjct 2158 CCATGCGATCAGCGAAATTATTCAGAGTCACCAAAACAGGTTGCCCTGA------TTGG- 2210
Query 301 TTTTTATCTAATAAATACACCCCTTC-CGAAG-TCGGGGTTTTTAGCATGTATTAGCTCT 358
| || |||||||| | | | | | ||| | | | ||| ||| ||||||||||
Sbjct 2211 TCTTCGTCTAATAAGTGCGCAGGTCCACGAGGAACTTGCTTTAGTGCACGTATTAGCTCC 2270
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
| | || | | ||||||| | ||| || | ||| | |||| ||| ||| ||||||
Sbjct 2271 AAATTTTTCGCAGTTATCCGTTTAGATAGTCAAAATCGAGTAAATTATAGCTGTTTTAAT 2330
Query 419 GAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCT 477
||||| ||||||| |||| || || | || | | || | ||||||||||||||||||
Sbjct 2331 GAGCCTTTCGCAGATTCATCGTTTAAAGATG--TGTTCTCACACATGCATGGCTTAATCT 2388
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|| | |||||||| || |||||||
Sbjct 2389 TTTATCTAAGCATATCACCGCTGGCAG 2415
>seq801
Length=439144
Score = 77.0 bits (84), Expect = 1e-11
Identities = 86/113 (76%), Gaps = 3/113 (3%)
Strand=Plus/Plus
Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231
|||||||||||| | ||| ||||||| |||||||| |||||| ||||||| || |
Sbjct 376202 ACCATGGTAGGCGCAGAGCCTGCCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCG 376261
Query 232 TCGCCGGCTC-AAGGCCATGCGATTCG--TTAAGTTATTATGAATCACCAAGG 281
||||||| || || || |||||| || | | ||||| || |||||||||
Sbjct 376262 TCGCCGGTTCGTAGACCGTGCGATCCGCCTCCATTTATTCAGAGTCACCAAGG 376314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509921777152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |