Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zootermopsis_20nevadensis_20[genbank_20GCA_5F000696155.1_202014-06- 05] 31,662 sequences; 485,009,472 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq513 136 3e-27 seq95 95.1 1e-14 >seq513 Length=652068 Score = 136 bits (150), Expect = 3e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || || ||| | |||||||| ||| ||||| ||| || ||||||||| | | Sbjct 206768 TTATTTAACGCCGTTGAGACGATGCCGTGTGTGAAAAAGAAGGCAGATTGGGCCCTTCAG 206709 Query 61456 TGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| | || | ||| || || |||||||| || || | || ||||| | || || Sbjct 206708 TGGATAGCGCACGA-AACTGCGACGTTTGGTGAGAGAGTGGTTGCGTTTGCTGCAGTGGA 206650 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| | || ||| |||| ||||| || ||||| ||||| ||||| || |||||||| Sbjct 206649 AGGTATCTTCTTCTCTGGAAGTTTTGCTGCTATCTTCTGGTTAAAGAAGCGGGGACTTAT 206590 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 ||||||||| |||||||||||||| | || ||||| ||||||| || Sbjct 206589 GCCCGGTCTCACCTTCAGCAATGAACTTATTTCACGAGACGAGGTCA 206543 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 |||| |||||| || ||||| | || || ||||| ||||| || || || || || Sbjct 207559 TGAAAGACATTTTATCTCCCATGTACTAGCATTTTTTGCAGCTTCAGATGGAATTGTTAA 207500 Query 61245 TGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||||||||| | || | ||| ||||| || ||||| | || || | || ||||| Sbjct 207499 TGAGAATTTGGTAGAGAGATTCAGCCAGGAAGTACAAGTAACAGAAGCAAGATGCTTCTA 207440 Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATAC 61364 ||||| ||||| || ||||| |||||||| || || ||||| || | | || ||||| Sbjct 207439 TGGCTTTCAGATAGCGATGGAAAATGTCCATTCAGAAATGTATAGCTTGTTGATTGATAC 207380 Query 61365 GTACATCAGGGA 61376 ||||| ||||| Sbjct 207379 CTACATAAGGGA 207368 >seq95 Length=16868 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA-ATCACC 66321 |||||||| || || || | ||||| || ||||||||||| ||| ||| | Sbjct 6573 TCACCCCAGCAGTCTGAAAGTCCAGGACAAGCATGCGGACACATCAGACTCCACATCTCG 6632 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | | ||| || || ||||||||||||||| ||||| || || ||||| ||||| || Sbjct 6633 TTGTTCTTC-ACTCGCTTCATAAATAGATCAGGAATCCACAGAGCATAGAAAAGATCCCG 6691 Query 66382 TGCTCGTTGCTCCTCAAT-GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGG 66440 ||||| ||||| | ||||| ||||| || ||| || |||||||| | || | Sbjct 6692 AGCTCGAATTTCCTCTTTCCCCGTG-TTTTTCTTCAGGTCAAGAAACTCAAACACATCTG 6750 Query 66441 CATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||||| |||||||| || ||||| || Sbjct 6751 CATGCCAGGGTTCCAGATAAATGGCAAA 6778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397414586211680