Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1376 89.7 8e-16 >seq1376 Length=1384563 Score = 89.7 bits (98), Expect = 8e-16 Identities = 169/240 (70%), Gaps = 9/240 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||| | || ||| || ||||| ||| |||| | ||||||||||| ||| Sbjct 239962 GTACAAGTGGCAGAGGTGTTATCAGCGTGAGCT-GATAACTCACACTTACTAGGAA-TTC 239905 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | || ||| |||| ||||||| ||||| | |||||| | || Sbjct 239904 CTCGTTCAGGGGAAATAATCACAATTCCCTATCCCGGTCACGGAAGAGTTTCAATGGTTT 239845 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | | ||||| | | |||| || | ||| | || |||||||||| ||| Sbjct 239844 ACCTATGCTTTTCGGCAATG--AATAGGCTAGCTGATTCTTCCATTGTAGCGCGCTTGCA 239787 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||| | ||||| ||||||||| ||||||||| | ||||| || |||| | ||||| Sbjct 239786 GCCCCAGAGATCTATAGGCATCACATACCTGTTATCG-CTCAATCT--CGTGCGGCTAAA 239730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987353240