Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20ceylanicum_20[genbank_20GCA_5F000688135.1_202014-03- 25] 1,736 sequences; 313,092,710 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1522 95.1 5e-17 seq1344 87.8 7e-15 >seq1522 Length=412789 Score = 95.1 bits (104), Expect = 5e-17 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||| ||| |||| ||||||||||||||||||| ||| ||| | || Sbjct 24280 AGAGCGTACAGGTTCCGACTCGAAGGATGGTGAACTATGCCTGAGCAGGACAAAGTCGGA 24339 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||||||| || | | | | |||||||| ||||||||| ||||| | | ||||| Sbjct 24340 GGAAACTCTGATGAAAGTCCATATCGGTTCTGACGTGCAAATGGATCGGTAGACTTGGGA 24399 Query 674 ATAGGGGCGA 683 | |||||||| Sbjct 24400 ACAGGGGCGA 24409 >seq1344 Length=3069366 Score = 87.8 bits (96), Expect = 7e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| ||||||||||||| |||||||||||||| ||| |||| ||||||||||| || Sbjct 576798 GTTGCGACCCGAAAGATGATGAACTATGCCTGAGCAGGACGAAGTCAGAGGAAACTGTGA 576739 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTG 650 |||| | || | |||||||| |||| Sbjct 576738 TGGAAGTCCGTATCGGTTCTGACGTG 576713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079962762800