Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1271 102 1e-19 >seq1271 Length=26381 Score = 102 bits (112), Expect = 1e-19 Identities = 160/223 (72%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| ||||||||||| | | | ||||| |||||||| | |||||||| ||| | Sbjct 9600 GTACAAATTGCAGGGACGTAATTATTGTGAGCT-GATGACTCACACTTACTAGAAATC-C 9657 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119 ||||| ||| || |||| |||| ||||||| ||| | | |||||| | || Sbjct 9658 GTCGTTTAAGGGAAATAATTACAATTCCCTATCCCGGTCAAGGAAGAGTTTCAACGGTTT 9717 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||| ||||| | || |||| | | ||| | | || ||||||||||| Sbjct 9718 ACCAATGCCTTTCGGCAATGG--ATAGGCCAGCTGATTCTTTTGTTGCAGCGCGCGTGCA 9775 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||| | |||||| ||| ||||||| ||||||||| | ||||| Sbjct 9776 GCCCCGGACATCTGAGGACATCACAAACCTGTTATCG-CTCAA 9817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751490188415