Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1102 114 2e-23 seq69901 93.3 7e-17 seq4087 87.8 3e-15 >seq1102 Length=28831 Score = 114 bits (126), Expect = 2e-23 Identities = 83/96 (86%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 || ||| ||||||||||||| ||| ||||||||| ||||| | |||||||||| |||||| Sbjct 1056 GTATCGCTCGTTATCGGAATGAACTAGACAAATCGCTCCATCGACTAAGAACGACCATGC 997 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||| ||| ||||||||||||||| |||||| Sbjct 996 ACCACCAACCACCAAATCAAGAAAGAGCTTTCAATC 961 >seq69901 Length=1077 Score = 93.3 bits (102), Expect = 7e-17 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||||||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||| Sbjct 844 CAGACAAATCGCTCCACCAACTAATAACGGCCATGCACCACCAACCACCAAATCGAGAAA 903 Query 243 GAGCTATCAATCTGTC 258 |||| || ||||||| Sbjct 904 AAGCTTTCGATCTGTC 919 >seq4087 Length=15099 Score = 87.8 bits (96), Expect = 3e-15 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 170 TATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229 ||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||| Sbjct 3919 TATCGGAATAAACCAGACAAATCGCTCCACCAACTAATAACTGCCATGCACCACCAACCA 3978 Query 230 TAG 232 || Sbjct 3979 CAG 3981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796259816661