Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4980 185 1e-44 seq6402 179 6e-43 >seq4980 Length=13968 Score = 185 bits (204), Expect = 1e-44 Identities = 131/149 (88%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| ||||| |||| | | |||| ||||||||||||||||||||||||| Sbjct 6985 TACTAAGCAAGATTACTATTGCAACAATTAGTCAACAGTAGGGTAAAACTAACCTGTCTC 6926 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 6925 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGCTGAACAATCCAACGCTTGGCG 6866 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCC 148 |||||||||||| ||||||||||||||| Sbjct 6865 AATTCTGCTTCGCAATGATAGGAAGAGCC 6837 >seq6402 Length=11009 Score = 179 bits (198), Expect = 6e-43 Identities = 130/149 (87%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | ||||| || | | | |||| ||||||||||||||||||||||||| Sbjct 8154 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGTAGGGTAAAACTAACCTGTCTC 8095 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 8094 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGCTGAACAATCCAACGCTTGGCG 8035 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCC 148 |||||||||||| | ||||||||||||| Sbjct 8034 AATTCTGCTTCGCAAAGATAGGAAGAGCC 8006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853802082336