Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1271 123 5e-26 >seq1271 Length=26381 Score = 123 bits (136), Expect = 5e-26 Identities = 188/262 (72%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 69 CGGCTTCTTAGAGGGACTATCGGC-TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTC 126 || ||||||||||||| | ||| | |||| | || | ||||| | ||||||||| Sbjct 9857 CGTCTTCTTAGAGGGATAAGCGGTATTTGGCCGCACGGGA--TTGAG-CGATAACAGGTT 9801 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||||||| ||| |||||| | |||| ||||||||||| || | ||| || | | Sbjct 9800 TGTGATGTCCTCAGATGTCCGGGGCTGCACGCGCGCTGCAACAAAAGAATCAGCTGGCCT 9741 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 ||| | | |||| |||| | ||||| | | ||||||| | || ||||||| | Sbjct 9740 ATC--CATTGCCGAAAGGCATTGGTAAACCGTTGAAACTCTTCCTTGACCGGGATAGGGA 9683 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||| ||||||| | ||| ||||| | || |||||||| | | ||||||||| | | | Sbjct 9682 ATTGTAATTATTTCCCTTAAACGACGGATTTCTAGTAAGTGTGAGTCATCAGCTCACAAT 9623 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||||||||||| |||||| Sbjct 9622 AATTACGTCCCTGCAATTTGTA 9601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946537139968