Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2497 95.1 4e-17 seq12065 91.5 4e-16 >seq2497 Length=20566 Score = 95.1 bits (104), Expect = 4e-17 Identities = 101/131 (77%), Gaps = 8/131 (6%) Strand=Plus/Minus Query 307 TCTAATAAATACACCCCTTCCGAAGTCGGGGTTT-TTAGCATGTATTAGCTCTAGAATTA 365 |||||||| | ||||| ||| ||||| |||||| || |||||||||||||| |||||| Sbjct 20562 TCTAATAATTGCACCCTTTCGAAAGTCAGGGTTTATTCGCATGTATTAGCTCCAGAATTG 20503 Query 366 CCACGGTTATCCATGTAGTAAGGTACTAT-CAAATAAACGATAACTGATTTAATGAGCCA 424 || | |||||||| || | ||| | | ||||| || | ||| | ||||||||| Sbjct 20502 CCGCAGTTATCCA------AAAGGACTTTCCGAATAAGTGACATCTGCTCTAATGAGCCG 20449 Query 425 TTCGCAGTTTC 435 ||||||||||| Sbjct 20448 TTCGCAGTTTC 20438 >seq12065 Length=6579 Score = 91.5 bits (100), Expect = 4e-16 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 || ||||||||||| || |||||||| |||||||| ||||||||||||||| ||||| Sbjct 5038 GCTTGCTGCCTTCCCTGAATGTGGTACCCGTTTCTGAGGCTCCCTCTCCGGGGATGAACC 4979 Query 149 CTAATTCCCCGTTACCCGTTGAT-ACCATGGTAGGCCACTATCCTAC 194 | ||| || ||||||| |||| |||||||||| | | || |||| Sbjct 4978 ATTATTTTCCATTACCCG-TGATAACCATGGTAGACTAATAGACTAC 4933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509343006976