Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014-
09-24] 18,635 sequences; 253,242,791 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq10626 161 1e-37
seq7720 161 1e-37
seq383 131 3e-28
seq13 125 1e-26
seq4099 95.1 2e-17
>seq10626
Length=2977
Score = 161 bits (178), Expect = 1e-37
Identities = 185/240 (77%), Gaps = 9/240 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||| || ||||| |||||||| | ||||||||||||| |
Sbjct 625 GTACAAATGGCAGGGACGTAATCAGCGTGAGCT-GATGACTCACACTTACTAGGAATT-C 682
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| ||| || |||| |||| ||||||| ||||| | |||||| | ||
Sbjct 683 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCGGTCACGGAAGAGTTTCAACGGTTT 742
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| |||| ||||| | || |||| | | ||| | || ||||||||||||||
Sbjct 743 ACCAATACCTTTCGGCAATGG--ATAGGCCAGCTGATTCTTCCATTGTAGCGCGCGTGCA 800
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|||| | |||||||||||||||||||||||||||| | ||||| || |||| | |||||
Sbjct 801 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT--CGTGCGGCTAAA 857
>seq7720
Length=5820
Score = 161 bits (178), Expect = 1e-37
Identities = 185/240 (77%), Gaps = 9/240 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||| || ||||| |||||||| | ||||||||||||| |
Sbjct 5576 GTACAAATGGCAGGGACGTAATCAGCGTGAGCT-GATGACTCACACTTACTAGGAATT-C 5633
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| ||| || |||| |||| ||||||| ||||| | |||||| | ||
Sbjct 5634 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCGGTCACGGAAGAGTTTCAACGGTTT 5693
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| |||| ||||| | || |||| | | ||| | || ||||||||||||||
Sbjct 5694 ACCAATACCTTTCGGCAATGG--ATAGGCCAGCTGATTCTTCCATTGTAGCGCGCGTGCA 5751
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|||| | |||||||||||||||||||||||||||| | ||||| || |||| | |||||
Sbjct 5752 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT--CGTGCGGCTAAA 5808
>seq383
Length=99270
Score = 131 bits (144), Expect = 3e-28
Identities = 178/240 (74%), Gaps = 9/240 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||| | |||||||||| ||| || ||||| ||||||| | |||||| |||||| |
Sbjct 8540 GTATAAATGACAGGGACGTAATCAGCGTGAGCTA-ATGACTCACACTTACTGGGAATT-C 8597
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| ||| || || | |||| ||||||| ||||| | |||||| | ||
Sbjct 8598 CTCGTTCAAGGGAAATAACTACAATTCCCTATCCCGGTCACGGAAGAGTTTCAACGGTTT 8657
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| |||| |||| | || |||| | | || | || ||| |||||||||||
Sbjct 8658 ACCAATACCTTACGGCAATGG--ATAGGCCAGCTGGTTCTTCCATTGTTGCGCGCGTGCG 8715
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|||| | |||||||||||||||||||||||||||| | ||||| || |||| | |||||
Sbjct 8716 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT--CGTGCGGCTAAA 8772
>seq13
Length=271176
Score = 125 bits (138), Expect = 1e-26
Identities = 177/240 (74%), Gaps = 9/240 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||| ||||| ||| || ||||| |||||||| ||||| ||||||||| |
Sbjct 156297 GTACAAATGGCAGGTACGTAATCAGCGTGAGCT-GATGACTCACGCTTTCTAGGAATT-C 156354
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119
|||||| || || ||||||||| ||||||| |||| | | ||| | | ||
Sbjct 156355 CTCGTTCCAGGGAAATAATTGCAATTCCCTATCCCGGCCACGGAATAGTTTTGACGGTTT 156414
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| |||| ||||| || ||| | | | ||| | || |||| |||| ||||
Sbjct 156415 ACCAATACCTTTCGGC--AGTGGATTGGCCAGCTGATTCTTCCATTGTAACGCGTGTGCA 156472
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|| | ||||| |||||||||||||||||||| ||| | ||||| || |||| | |||||
Sbjct 156473 GCTCCGAACACCTAAGGGCATCACAGACCTGCTATCG-CTCAACCT--CGTGCGGCTAAA 156529
>seq4099
Length=15255
Score = 95.1 bits (104), Expect = 2e-17
Identities = 105/136 (77%), Gaps = 3/136 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||| || |||| ||||||||| | ||||||||||| |||
Sbjct 14528 GTACAAATGGCAGGGACGTAATCAGCGTGAGC-TGATGACTCACACTTACTAGGAA-TTC 14585
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| ||| || |||| |||| ||||||| ||||| | |||||| | ||
Sbjct 14586 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCGGTCACGGAAGAGTTTCAACGGTTT 14645
Query 120 ACCCGGACCTGTCGGC 135
||| |||| |||||
Sbjct 14646 ACCAATACCTTTCGGC 14661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751864244025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |