Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Angiostrongylus_20cantonensis_20[genbank_20GCA_5F000950995.1_202014-
09-24] 18,635 sequences; 253,242,791 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq5270 138 2e-30
>seq5270
Length=10992
Score = 138 bits (152), Expect = 2e-30
Identities = 182/246 (74%), Gaps = 5/246 (2%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
||||||||||| ||||||||||| ||| | || || |||||| |||| | ||||||
Sbjct 8460 TTTACTTTGAATAAATTAGAGTGCTCAGAACAAGCGTTTGCTTGAATGGTCGATCATGGA 8401
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||||| || ||||| | |||||||| ||| |||| ||| | || | |||||||||||
Sbjct 8400 ATAATAAAAGAGGAC-TTCGGTTCTA-TTTATTGG-TTCAGGAACTGAAGTAATGATTAA 8344
Query 194 TAGGGA-TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
||||| | ||||||| | |||| | | ||||||||||||| |||| |
Sbjct 8343 GAGGGACAATTCGGGGGCATTCGTATCCCTGCGCGAGAGGTGAAATTCGTGGACCGCAGG 8284
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||| ||| |||||||| || ||||| |||| ||||||||||| ||||||||||
Sbjct 8283 GGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 8225
Query 313 TAGGGG 318
|| ||
Sbjct 8224 CAGAGG 8219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915029452480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |