Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201
4-09-24] 6,384 sequences; 262,782,696 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3834 167 4e-39
seq2581 143 4e-32
>seq3834
Length=8065
Score = 167 bits (184), Expect = 4e-39
Identities = 186/240 (78%), Gaps = 9/240 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||| || ||||| |||||||| | ||||||||||||| |
Sbjct 1620 GTACAAATGGCAGGGACGTAATCAGCGTGAGCT-GATGACTCACACTTACTAGGAATT-C 1563
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| ||| || |||| |||| ||||||| ||||| | |||||| | ||
Sbjct 1562 CTCGTTCAAGGGAAATAATTACAATTCCCTATCCCGGTCACGGAAGAGTTTCAACGGTTT 1503
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| |||| ||||| | || |||| | ||||| | || ||||||||||||||
Sbjct 1502 ACCAATACCTTTCGGCAATGG--ATAGGCCAGTTGATTCTTCCATTGTAGCGCGCGTGCA 1445
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|||| | |||||||||||||||||||||||||||| | ||||| || |||| | |||||
Sbjct 1444 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT--CGTGCGGCTAAA 1388
>seq2581
Length=25017
Score = 143 bits (158), Expect = 4e-32
Identities = 183/241 (76%), Gaps = 11/241 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||| || ||| | ||||| |||||||| | |||| |||||||| |
Sbjct 271 GTACAAATGGCAGGGATATAATCAGTGTGAGCT-GATGACTCACACTTAGTAGGAATT-C 328
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCAC-GATGAAATTTCAAAGATT 119
||||| ||| || |||| |||| ||||||| |||| || || |||||| | ||
Sbjct 329 TTCGTTCAAGGAAAATAATTACAATTCCCTATCCCGGTCACAGAAGAG-TTTCAACGGTT 387
Query 120 -ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| |||| ||||| | || |||| | ||||| | || ||||||||||||||
Sbjct 388 TACCAATACCTTTCGGCAATGG--ATAGGCCAGTTGATTCTTCCATTGTAGCGCGCGTGC 445
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAA 237
|||| | |||||||||||||||||||||||||||| | ||||| || |||| | ||||
Sbjct 446 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATCG-CTCAATCT--CGTGCGGCTAA 502
Query 238 A 238
|
Sbjct 503 A 503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751953492560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |