Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201
4-09-24] 6,384 sequences; 262,782,696 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq3834 138 2e-30
>seq3834
Length=8065
Score = 138 bits (152), Expect = 2e-30
Identities = 182/246 (74%), Gaps = 5/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
||||||||||| ||||||||||| ||| | || || |||||| |||| | ||||||
Sbjct 740 TTTACTTTGAATAAATTAGAGTGCTCAGAACAAGCGTTTGCTTGAATGGTCGATCATGGA 799
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||||| || ||||| | |||||||| ||| |||| ||| | || | |||||||||||
Sbjct 800 ATAATAAAAGAGGAC-TTCGGTTCTA-TTTATTGG-TTCAGGAACGGAAGTAATGATTAA 856
Query 194 TAGGGA-TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
||||| | ||||||| | |||| | | ||||||||||||| |||| |
Sbjct 857 GAGGGACAATTCGGGGGCATTCGTATCCCTGCGCGAGAGGTGAAATTCGTGGACCGCAGG 916
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||| ||| |||||||| || ||||| |||| ||||||||||| ||||||||||
Sbjct 917 GGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 975
Query 313 TAGGGG 318
|| ||
Sbjct 976 CAGAGG 981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915141573632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |