Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3834 138 2e-30 >seq3834 Length=8065 Score = 138 bits (152), Expect = 2e-30 Identities = 182/246 (74%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||| ||||||||||| ||| | || || |||||| |||| | |||||| Sbjct 740 TTTACTTTGAATAAATTAGAGTGCTCAGAACAAGCGTTTGCTTGAATGGTCGATCATGGA 799 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||| || ||||| | |||||||| ||| |||| ||| | || | ||||||||||| Sbjct 800 ATAATAAAAGAGGAC-TTCGGTTCTA-TTTATTGG-TTCAGGAACGGAAGTAATGATTAA 856 Query 194 TAGGGA-TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||| | ||||||| | |||| | | ||||||||||||| |||| | Sbjct 857 GAGGGACAATTCGGGGGCATTCGTATCCCTGCGCGAGAGGTGAAATTCGTGGACCGCAGG 916 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||| ||| |||||||| || ||||| |||| ||||||||||| |||||||||| Sbjct 917 GGGACGCCCTAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 975 Query 313 TAGGGG 318 || || Sbjct 976 CAGAGG 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915141573632