Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3834 89.7 2e-16 seq1483 71.6 6e-11 >seq3834 Length=8065 Score = 89.7 bits (98), Expect = 2e-16 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||| || Sbjct 3183 GGAAAAGAAACTAACAAGGATTCCCAAAGTAACGGCGAGTGAACTGGGAAAAGCCCAACG 3242 Query 61 CCGAATC 67 | ||||| Sbjct 3243 CTGAATC 3249 Score = 89.7 bits (98), Expect = 2e-16 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||| || Sbjct 4020 GGAAAAGAAACTAACAAGGATTCCCAAAGTAACGGCGAGTGAACTGGGAAAAGCCCAACG 4079 Query 61 CCGAATC 67 | ||||| Sbjct 4080 CTGAATC 4086 >seq1483 Length=57526 Score = 71.6 bits (78), Expect = 6e-11 Identities = 56/67 (84%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| | || | || | ||||||||||||||||| ||||| |||||| || Sbjct 1046 GGAAAAGAAACTAGCAAGAAGTCACAAAGTAACGGCGAGTGAACTGGGAAAAGCCCAACG 1105 Query 61 CCGAATC 67 | ||||| Sbjct 1106 CTGAATC 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230386210560