Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 187 5e-45
>seq3849
Length=5134
Score = 187 bits (206), Expect = 5e-45
Identities = 238/325 (73%), Gaps = 7/325 (2%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGA-TTC 69
||||| |||||||||| |||||| ||| || ||||||| || ||||| || | |||
Sbjct 2173 AGGGGAGTGAAATAGATCCTGAAACCGTATGCGTACAAGCAGTGGGAGCAGACTTTGTTC 2114
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
||||| |||| ||||||| |||||| | | ||| ||| | ||| ||||| ||||
Sbjct 2113 TGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATTT-TCAGTGGCGAGCTTAAC 2055
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | || || || || ||||||||| ||||| |||||| | ||| | |||
Sbjct 2054 CGAATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGGA 2000
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| | |||||| ||| | ||||||||||| |||||| | ||
Sbjct 1999 ATAGACCCGAAACCGGGCGATCTATCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTG 1940
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
||||||||||||| | |||||||||||| |||||||| | || | || ||||||||
Sbjct 1939 GAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGTGGATCGGAGTGAAAGG 1880
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
| |||||| || ||| |||||| ||
Sbjct 1879 CTAATCAAGCTCGGAGATAGCTGGT 1855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972391375360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |