Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq12862 219 3e-55 seq3849 174 1e-41 seq20948 156 3e-36 >seq12862 Length=1687 Score = 219 bits (242), Expect = 3e-55 Identities = 123/124 (99%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1646 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 1587 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1586 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 1527 Query 135 TGTA 138 |||| Sbjct 1526 TGTA 1523 >seq3849 Length=5134 Score = 174 bits (192), Expect = 1e-41 Identities = 113/124 (91%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 3181 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 3240 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 3241 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 3300 Query 135 TGTA 138 |||| Sbjct 3301 TGTA 3304 >seq20948 Length=1046 Score = 156 bits (172), Expect = 3e-36 Identities = 86/86 (100%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 53 AATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCAC 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 504 AATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCAC 445 Query 113 TCCCATGGTGTGACGGGCGGTGTGTA 138 |||||||||||||||||||||||||| Sbjct 444 TCCCATGGTGTGACGGGCGGTGTGTA 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345463903800