Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq12862 219 3e-55
seq3849 174 1e-41
seq20948 156 3e-36
>seq12862
Length=1687
Score = 219 bits (242), Expect = 3e-55
Identities = 123/124 (99%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1646 CCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 1587
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 1527
Query 135 TGTA 138
||||
Sbjct 1526 TGTA 1523
>seq3849
Length=5134
Score = 174 bits (192), Expect = 1e-41
Identities = 113/124 (91%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || ||
Sbjct 3181 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 3240
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 3241 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 3300
Query 135 TGTA 138
||||
Sbjct 3301 TGTA 3304
>seq20948
Length=1046
Score = 156 bits (172), Expect = 3e-36
Identities = 86/86 (100%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 53 AATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCAC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 AATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCAC 445
Query 113 TCCCATGGTGTGACGGGCGGTGTGTA 138
||||||||||||||||||||||||||
Sbjct 444 TCCCATGGTGTGACGGGCGGTGTGTA 419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345463903800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |