Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5253 122 2e-25 >seq5253 Length=3867 Score = 122 bits (134), Expect = 2e-25 Identities = 146/193 (76%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||||||||||||||||||| | |||||||||||||||||||| | | | ||| Sbjct 3843 GCATGGAATAATAGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAA 3785 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA- 245 || |||| ||||| | |||||| | |||| || |||||||||||||||||| Sbjct 3784 TGGTTAAGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGAC 3725 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || | |||| | ||||||||||| || ||||| |||| ||||||||||| ||| Sbjct 3724 CGTAGCG-AGACGTCCGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAA 3667 Query 306 CGAAAGTTAGGGG 318 ||||||| || || Sbjct 3666 CGAAAGTCAGAGG 3654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914815570240