Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq5253 122 2e-25
>seq5253
Length=3867
Score = 122 bits (134), Expect = 2e-25
Identities = 146/193 (76%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
||||||||||||||||||||| | |||||||||||||||||||| | | | |||
Sbjct 3843 GCATGGAATAATAGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAA 3785
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA- 245
|| |||| ||||| | |||||| | |||| || ||||||||||||||||||
Sbjct 3784 TGGTTAAGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGAC 3725
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|| | |||| | ||||||||||| || ||||| |||| ||||||||||| |||
Sbjct 3724 CGTAGCG-AGACGTCCGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAA 3667
Query 306 CGAAAGTTAGGGG 318
||||||| || ||
Sbjct 3666 CGAAAGTCAGAGG 3654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914815570240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |