Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5253 174 7e-41
>seq5253
Length=3867
Score = 174 bits (192), Expect = 7e-41
Identities = 221/309 (72%), Gaps = 30/309 (10%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| |||||||||||||||||||| ||| | |||||| ||||||| ||
Sbjct 1173 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCGAGTCATTGGGTGGTAA 1114
Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACCC-GTG- 506
||| ||||||||||||| || | || ||||| | |||
Sbjct 1113 ACCTAAAGGCGTAATGAAAGTAAAGGCTGTCTTGTTACGGCTGATATGGGATCTGTGTGG 1054
Query 507 ------------AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554
| || ||||||| | || ||| | | ||| |||| ||| |
Sbjct 1053 CTTTCGAGCCATACGGCGCACCATAGCCCCGTCCCGGTTGCTTGCAATGGGGCGGAGGTA 994
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||| | | ||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 993 GAGCGCATACGCTGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAG 934
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||| | || |||||||||| ||||||||||||||||| | |||||||
Sbjct 933 GAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTA 874
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 873 TAGGGGCGA 865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079098992750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |