Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 98.7 9e-19
seq20948 91.5 1e-16
>seq3849
Length=5134
Score = 98.7 bits (108), Expect = 9e-19
Identities = 91/114 (80%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||||| ||| || ||||||| ||| |||||| || |||||||||||
Sbjct 2639 GCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGC 2580
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
| |||||| | |||| | | |||||||| |||| || |||||||| |||||
Sbjct 2579 TTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCC 2526
>seq20948
Length=1046
Score = 91.5 bits (100), Expect = 1e-16
Identities = 137/189 (72%), Gaps = 17/189 (9%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|||||||||||| ||| || ||||||| ||||| |||| ||| |||||| |||| ||
Sbjct 638 ACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGTCG 697
Query 66 GGGATTGGCACATACGAA---TTGATCCGTAGATATCCGAATGGGGCAACCCGATAT-AT 121
| || | ||| ||| |||| ||| |||| |||||||||| ||||| | | |
Sbjct 698 GCGA---GGTGATATGAACCTTTGACCCGGCGATACCCGAATGGGGAAACCCAGTGTGTT 754
Query 122 TGGAGATA-TATCAT------AACGC-TA--GGCGTTAGGCGAACGTGGGGAACTGAAAC 171
| || | | |||||| || | || ||| | |||||||| |||||||||||||
Sbjct 755 TCGACACACTATCATGTCATGAATACATAGTGGCATGAGGCGAACCGGGGGAACTGAAAC 814
Query 172 ATCTAAGTA 180
|||||||||
Sbjct 815 ATCTAAGTA 823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476605978905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |