Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq5253 241 2e-61
>seq5253
Length=3867
Score = 241 bits (266), Expect = 2e-61
Identities = 202/243 (83%), Gaps = 5/243 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||
Sbjct 3172 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 3230
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC-ACCAACCATAGTCG 135
|||| ||||| | || | |||||||||||||| | || | | || ||
Sbjct 3231 G-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGAACTTGTTTATCCG 3289
Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195
||| |||||||| ||| || |||||| ||||||||||||| ||||||||||||||||
Sbjct 3290 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 3347
Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||
Sbjct 3348 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 3407
Query 256 GTC 258
|||
Sbjct 3408 GTC 3410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796475763405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |