Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5253 241 2e-61 >seq5253 Length=3867 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 3172 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 3230 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC-ACCAACCATAGTCG 135 |||| ||||| | || | |||||||||||||| | || | | || || Sbjct 3231 G-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGAACTTGTTTATCCG 3289 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 3290 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 3347 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 3348 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 3407 Query 256 GTC 258 ||| Sbjct 3408 GTC 3410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796475763405