Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 203 6e-50
seq12342 201 2e-49
seq12862 176 9e-42
seq21203 82.4 2e-13
seq3172 82.4 2e-13
>seq3849
Length=5134
Score = 203 bits (224), Expect = 6e-50
Identities = 232/306 (76%), Gaps = 7/306 (2%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| |||| |||||||| |||||| |||||||||||||||||||||
Sbjct 4297 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 4356
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||| | | ||| |||||||| || | ||| |||
Sbjct 4357 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 4416
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| ||||||| || |||| | ||||||||| |||||| | | || ||||| |
Sbjct 4417 CGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAATCCGACCTAGGCTCATCTGATA 4476
Query 181 GCG-ATAAATCTTTGGTCAAAGAATGATGCCATCC-TCTGACATTATGCGGTATTAGCGT 238
||| | | |||| || | | || | ||| ||||||||||||||||
Sbjct 4477 GCGCAAGGCCCGAAGGTC---CCCTGCTTTCTCCCGTAGGAC-GTATGCGGTATTAGCGT 4532
Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298
||||||| |||||||| || | || |||||| || || | | ||||||||||||||
Sbjct 4533 CCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCT-AGGCATTACTCACCCGTCC 4591
Query 299 GCCACT 304
||| ||
Sbjct 4592 GCCGCT 4597
>seq12342
Length=1752
Score = 201 bits (222), Expect = 2e-49
Identities = 143/164 (87%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| |||| |||||||| ||| || |||||||||||||||||||||
Sbjct 408 GGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 467
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | || |||||||| || ||||| |||
Sbjct 468 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 527
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCC 164
|||||||||||| ||| ||||| |||||||||||||||| |||
Sbjct 528 CGTCGGCTTGGTAAGCTTTTATCCCACCAACTACCTAATCTGCC 571
>seq12862
Length=1687
Score = 176 bits (194), Expect = 9e-42
Identities = 135/160 (84%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 564 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 505
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| |||
Sbjct 504 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGAT 445
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||| || |||| || ||| | |||| |||| ||||||
Sbjct 444 CGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATC 405
>seq21203
Length=1031
Score = 82.4 bits (90), Expect = 2e-13
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGG-AGTCTGGGCCGTGTCT 77
|||| |||||||| || || ||| ||||||||||||| | || ||| |||||||| |||
Sbjct 136 TTTCGCCCATTGTAGAAAATTCCCTACTGCTGCCTCCCTTGGGTAGTGTGGGCCGTATCT 77
Query 78 CAGTCCCAATGTGGCCGTTCAACCTCTCAG 107
|||||||| ||||| ||| |||||| ||
Sbjct 76 CAGTCCCATTGTGGTTATTCTACCTCTGAG 47
>seq3172
Length=6020
Score = 82.4 bits (90), Expect = 2e-13
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGG-AGTCTGGGCCGTGTCT 77
|||| |||||||| || || ||| ||||||||||||| | || ||| || ||||| |||
Sbjct 3964 TTTCGCCCATTGTAGAAAATTCCCTACTGCTGCCTCCCTTGGGTAGTATGAGCCGTATCT 4023
Query 78 CAGTCCCAATGTGGCCGTTCAACCTCTCAG 107
|||||||| ||||| ||| |||||||||
Sbjct 4024 CAGTCCCATTGTGGTTATTCTACCTCTCAG 4053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 997980622080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |