Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 187 6e-45
>seq3849
Length=5134
Score = 187 bits (206), Expect = 6e-45
Identities = 290/405 (72%), Gaps = 12/405 (3%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||| | || ||||||||||||| |||||| |||| | | || ||| | |
Sbjct 1289 CGACTACGCTTTTCAGCCTCGCCTTAGGGACCGACTAACCCTGCGTCGATTAACGTTGCG 1348
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATT--CCCACCCGTCACACGCTACTCATGCC 118
| |||| |||||| |||||| | | || | ||||| | | || |||||||| |
Sbjct 1349 CAGGAAACCTTGGTCTTTCGGCGTGGGTGTTTTTCACACCCATTAT-CGTTACTCATGTC 1407
Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176
|||||| |||| | || | ||||| || | || | || |||||| || |||
Sbjct 1408 AGCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCACAGGCTTACA 1465
Query 177 CGACGCTCCCCTACCCAACCACAC-AGGTTGCCAC----AGCTTCGGCGGATAACTTAAG 231
||||||| ||||| | || | | | || || |||||||| | || || ||
Sbjct 1466 GAACGCTCCTCTACCGCATCATCCGAAGATGATACCCGTAGCTTCGGTGTATGGTTTGAG 1525
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| |||
Sbjct 1526 CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAG 1585
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| ||||||||||||| | |||||| || ||||||| |||||||||
Sbjct 1586 GGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTT 1645
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396
| || |||| ||| |||||||||| | |||||| |||||||||
Sbjct 1646 AACCATAACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCT 1690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177105349120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |