Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3849 187 6e-45 >seq3849 Length=5134 Score = 187 bits (206), Expect = 6e-45 Identities = 290/405 (72%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | | || ||| | | Sbjct 1289 CGACTACGCTTTTCAGCCTCGCCTTAGGGACCGACTAACCCTGCGTCGATTAACGTTGCG 1348 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATT--CCCACCCGTCACACGCTACTCATGCC 118 | |||| |||||| |||||| | | || | ||||| | | || |||||||| | Sbjct 1349 CAGGAAACCTTGGTCTTTCGGCGTGGGTGTTTTTCACACCCATTAT-CGTTACTCATGTC 1407 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | || | || |||||| || ||| Sbjct 1408 AGCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCACAGGCTTACA 1465 Query 177 CGACGCTCCCCTACCCAACCACAC-AGGTTGCCAC----AGCTTCGGCGGATAACTTAAG 231 ||||||| ||||| | || | | | || || |||||||| | || || || Sbjct 1466 GAACGCTCCTCTACCGCATCATCCGAAGATGATACCCGTAGCTTCGGTGTATGGTTTGAG 1525 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| ||| Sbjct 1526 CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAG 1585 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| ||||||||||||| | |||||| || ||||||| ||||||||| Sbjct 1586 GGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTT 1645 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || |||| ||| |||||||||| | |||||| ||||||||| Sbjct 1646 AACCATAACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCT 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177105349120