Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3849 196 4e-48 seq20948 156 4e-36 seq12862 156 4e-36 >seq3849 Length=5134 Score = 196 bits (216), Expect = 4e-48 Identities = 140/161 (87%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| Sbjct 3373 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCACCTCGCG 3432 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| ||||||||| ||||||||| ||||||| ||||| || ||||||||| Sbjct 3433 GCTTGGCAACCCTCTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 3492 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 3493 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 3533 >seq20948 Length=1046 Score = 156 bits (172), Expect = 4e-36 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| ||||| || | | ||| | |||||| Sbjct 350 TCGAGTTGCAGACTCCAATCCGGACTACGACGTACTTTATGAGGTCCGCTTGCTCTCGCG 291 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || | || ||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 290 AGGTCGCTTCTCTTTGTATACGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 231 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||| |||| |||| Sbjct 230 TGATGACTTGACGTCATCCCCACCTTCCTCCAGTTTATCAC 190 >seq12862 Length=1687 Score = 156 bits (172), Expect = 4e-36 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| ||||| || | | ||| | |||||| Sbjct 1454 TCGAGTTGCAGACTCCAATCCGGACTACGACGTACTTTATGAGGTCCGCTTGCTCTCGCG 1395 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || | || ||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 1394 AGGTCGCTTCTCTTTGTATACGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 1335 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||| |||| |||| Sbjct 1334 TGATGACTTGACGTCATCCCCACCTTCCTCCAGTTTATCAC 1294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415830719850