Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3849 253 4e-65 seq20948 158 2e-36 >seq3849 Length=5134 Score = 253 bits (280), Expect = 4e-65 Identities = 255/329 (78%), Gaps = 18/329 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||| | Sbjct 2642 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 2583 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| || Sbjct 2582 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGC 2523 Query 121 CCT------TTGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAA 173 | | ||| | | || || |||||||||||||| | ||||||| || ||| Sbjct 2522 CATCATAAGATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAA 2465 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 2464 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 2405 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290 ||||| |||| |||| ||| ||| | |||| ||| |||| ||||||||| Sbjct 2404 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 2351 Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 2350 GTGCGGCCATAGTGGGTGATAGCCCTGTA 2322 >seq20948 Length=1046 Score = 158 bits (174), Expect = 2e-36 Identities = 189/252 (75%), Gaps = 10/252 (4%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| |||||||||| |||| | | |||||||||||| ||| || |||||||||| Sbjct 636 ACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGT 695 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 ||| ||| | | | | |||||| ||| ||| |||||||||||||||| | || Sbjct 696 CGGCGAG-GTGATATGAACCTTTGACCCGGCGATACCCGAATGGGGAAACCCAGTGTGTT 754 Query 126 GGGTCA---TTGCATGC--TGAATACATA--GGTATGCAAAGCGAACGCGGCGAACTGAA 178 | || | |||| |||||||||| || ||| | |||||| || |||||||| Sbjct 755 TCGACACACTATCATGTCATGAATACATAGTGGCATG--AGGCGAACCGGGGGAACTGAA 812 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct 813 ACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 872 Query 239 ATGGGATGAGCC 250 |||| ||||| Sbjct 873 CGGGGAAGAGCC 884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918014226080