Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 253 4e-65
seq20948 158 2e-36
>seq3849
Length=5134
Score = 253 bits (280), Expect = 4e-65
Identities = 255/329 (78%), Gaps = 18/329 (5%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||| |
Sbjct 2642 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 2583
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| ||
Sbjct 2582 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGC 2523
Query 121 CCT------TTGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAA 173
| | ||| | | || || |||||||||||||| | ||||||| || |||
Sbjct 2522 CATCATAAGATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAA 2465
Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233
|||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 2464 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 2405
Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290
||||| |||| |||| ||| ||| | |||| ||| |||| |||||||||
Sbjct 2404 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 2351
Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319
| ||||||| |||||||||||| |||
Sbjct 2350 GTGCGGCCATAGTGGGTGATAGCCCTGTA 2322
>seq20948
Length=1046
Score = 158 bits (174), Expect = 2e-36
Identities = 189/252 (75%), Gaps = 10/252 (4%)
Strand=Plus/Plus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| |||||||||| |||| | | |||||||||||| ||| || ||||||||||
Sbjct 636 ACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGT 695
Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125
||| ||| | | | | |||||| ||| ||| |||||||||||||||| | ||
Sbjct 696 CGGCGAG-GTGATATGAACCTTTGACCCGGCGATACCCGAATGGGGAAACCCAGTGTGTT 754
Query 126 GGGTCA---TTGCATGC--TGAATACATA--GGTATGCAAAGCGAACGCGGCGAACTGAA 178
| || | |||| |||||||||| || ||| | |||||| || ||||||||
Sbjct 755 TCGACACACTATCATGTCATGAATACATAGTGGCATG--AGGCGAACCGGGGGAACTGAA 812
Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238
||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 813 ACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAA 872
Query 239 ATGGGATGAGCC 250
|||| |||||
Sbjct 873 CGGGGAAGAGCC 884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918014226080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |