Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq3849 343 5e-92
>seq3849
Length=5134
Score = 343 bits (380), Expect = 5e-92
Identities = 422/568 (74%), Gaps = 20/568 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| ||| ||||||||||||||| | ||| ||| ||| |||| || ||| |||| |
Sbjct 300 TCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCTACGACC-GATTTC 358
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| ||| | ||||| | ||||| | | |||||||||| ||| ||||| | ||||||||
Sbjct 359 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCA 417
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179
|| ||||||||||||| |||||||| | | || ||| | || || |||||| ||
Sbjct 418 GTCAAACTACCCACCATACACTGTCCTCGATCCGGATAACGGACCTGAGTTAGAA--CCT 475
Query 180 CTACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| | | | ||| |||||||||||| | |||||| ||| |||| ||| |||
Sbjct 476 CAAAGTTGCCAGGGTGGTATTTCAAGGTTGGCTCCACGCGAACTGGCGTCCACGCTTCAA 535
Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT 297
|| |||||||||||||||||||| | | || ||| | | |||||||||| |||||
Sbjct 536 AGCCTCCCACCTATCCTACACAAGCAAATTCAAAGTCCAGTGCAAAGCTATAGTAAAGGT 595
Query 298 CC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGA-GCATCTTTACTCGTACTGCAATTTC 355
| |||||||||| |||| |||||| || || ||||||| || | | |||||||
Sbjct 596 TCACGGGGTCTTTCCGTCTAGCCGCG-GATACACTGCATCTTCACAGCGATTTCAATTTC 654
Query 356 ACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTT 415
|| | | || ||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct 655 ACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTT 714
Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGG 475
||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct 715 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGG 774
Query 476 CTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGC 535
|||| || | || || | || ||| || | |||||||||| ||
Sbjct 775 CTTCGATCAAGAGCTTCGC----------GTTAGCTAACCCCATCAATTAACCTTCCGGC 824
Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563
||||||||||||||| || ||||| ||
Sbjct 825 ACCGGGCAGGCGTCACACCCTATACGTC 852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1701684906880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |