Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_033727.1 Length=11330 Score E Sequences producing significant alignments: (Bits) Value seq5355 100 2e-17 >seq5355 Length=3795 Score = 100 bits (110), Expect = 2e-17 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 10486 CCTAAATTTTACGATCATGCTACTGGTATTCAGACTGTTAGAGGTGGGCAACAGGTTGGA 10545 ||||| ||||| ||||| ||||||| |||||| | ||||||| || ||| |||||| Sbjct 719 CCTAAGTTTTATGATCAGTCTACTGGAATTCAGCTTATTAGAGGCGGTCAAACTGTTGGA 660 Query 10546 GAAGGTTTCTTTTCGTCGGTCTTCAATTCGTTTTACAACATTATTTATCATTTCTGGGGA 10605 ||||| || || | ||||| || ||||| ||||| || || ||||||||||| ||| || Sbjct 659 GAAGGATTTTTCGCTTCGGTGTTAAATTCCTTTTATAATATCATTTATCATTTTTGGAGA 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36123721439080