Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1040 154 3e-35 seq136 89.7 9e-16 >seq1040 Length=62949 Score = 154 bits (170), Expect = 3e-35 Identities = 185/246 (75%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||||||||||||||| | | || ||| | || |||||| ||||||| Sbjct 1679 TTTACTTTGAAAAAATTAGAGTGCTTCACGCGGGCTTATGTCTGAATACTCGTGCATGGA 1738 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||||||||||| | |||||||||||||||||||| | | | ||||| |||| Sbjct 1739 ATAATAGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAATGGTTAA 1797 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA-TTTATTG 252 ||||| | |||||| | |||| || |||||||||||||||||| || | Sbjct 1798 GAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGACCGTAGCG 1857 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||| | ||||||||||| || ||||| |||| ||||||||||| |||||||||| Sbjct 1858 -AGACGTCCGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 1915 Query 313 TAGGGG 318 || || Sbjct 1916 CAGAGG 1921 >seq136 Length=225551 Score = 89.7 bits (98), Expect = 9e-16 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct 203237 GCATGGAATAATGGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGGGATAA 203295 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 || |||| |||||| | ||| | ||| | | || |||||||||||||||||| Sbjct 203296 TGGTTAAAAGGGATGGACGGAGCATTCACGGCGCTA-CGTGAGAGGTGAAATTCTTGGAC 203354 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 | | ||| | ||| ||||||| || |||| |||| | ||||||||| ||| Sbjct 203355 TGCAGCAGGACGTCCGACT-CGAAAGCATTTGTCAAGAATGTCTACATTAATCA-AAAAC 203412 Query 307 GAAAGTTAGG 316 |||||| ||| Sbjct 203413 GAAAGTCAGG 203422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914909790080